FFCP PHASE1:Hg19::chr10:79617174..79617179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79617174..79617179,- | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_at_chr10:79617174..79617179,- | |description=CAGE_peak_at_chr10:79617174..79617179,- | ||
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|ontology_enrichment_celltype=CL:0000039!9.06e-13!7;CL:0000586!9.06e-13!7 | |ontology_enrichment_celltype=CL:0000039!9.06e-13!7;CL:0000586!9.06e-13!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.52e-43;7!CL:0000586;4.52e-43;7 | |ontology_enrichment_celltype_v019=CL:0000039;4.52e-43;7!CL:0000586;4.52e-43;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.53e-43,7;CL:0000586,4.53e-43,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.61e-34;1 | |ontology_enrichment_development_v019=UBERON:0003124;3.61e-34;1 | ||
|ontology_enrichment_disease=DOID:1799!1.19e-10!1;DOID:10165!1.19e-10!1;DOID:1798!1.19e-10!1;DOID:178!2.74e-10!1;DOID:326!2.74e-10!1;DOID:3978!2.74e-10!1;DOID:3394!2.74e-10!1;DOID:5844!2.74e-10!1;DOID:3095!5.87e-07!22;DOID:2994!5.87e-07!22 | |ontology_enrichment_disease=DOID:1799!1.19e-10!1;DOID:10165!1.19e-10!1;DOID:1798!1.19e-10!1;DOID:178!2.74e-10!1;DOID:326!2.74e-10!1;DOID:3978!2.74e-10!1;DOID:3394!2.74e-10!1;DOID:5844!2.74e-10!1;DOID:3095!5.87e-07!22;DOID:2994!5.87e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.49e-14;22!DOID:2994;2.49e-14;22 | |ontology_enrichment_disease_v019=DOID:3095;2.49e-14;22!DOID:2994;2.49e-14;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.49e-14,22;DOID:2994,2.49e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0006947!5.69e-28!3;UBERON:0004054!5.69e-28!3;UBERON:0005904!3.76e-21!4;UBERON:0001000!9.84e-11!1;UBERON:0005352!9.84e-11!1;UBERON:0006122!1.08e-10!1;UBERON:0000998!1.57e-10!1;UBERON:0006868!1.57e-10!1;UBERON:0001301!3.01e-10!1;UBERON:0004175!5.22e-09!25;UBERON:0003135!4.85e-08!11 | |ontology_enrichment_uberon=UBERON:0006947!5.69e-28!3;UBERON:0004054!5.69e-28!3;UBERON:0005904!3.76e-21!4;UBERON:0001000!9.84e-11!1;UBERON:0005352!9.84e-11!1;UBERON:0006122!1.08e-10!1;UBERON:0000998!1.57e-10!1;UBERON:0006868!1.57e-10!1;UBERON:0001301!3.01e-10!1;UBERON:0004175!5.22e-09!25;UBERON:0003135!4.85e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001000;8.34e-34;1!UBERON:0005352;8.34e-34;1!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0001987;1.32e-09;4!UBERON:0005904;1.63e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0001000;8.34e-34;1!UBERON:0005352;8.34e-34;1!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0001987;1.32e-09;4!UBERON:0005904;1.63e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,7.06e-34,1;UBERON:0005352,7.06e-34,1;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0005904,1.57e-09,4 | |||
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|short_description=p@chr10:79617174..79617179,- | |short_description=p@chr10:79617174..79617179,- | ||
}} | }} |
Latest revision as of 15:49, 23 July 2015
Short description: | p@chr10:79617174..79617179, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79617174..79617179, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.53e-43 | 7 |
germ cell | 4.53e-43 | 7 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 7.06e-34 | 1 |
spermatic cord | 7.06e-34 | 1 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
duct of male reproductive system | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.49e-14 | 22 |
germ cell cancer | 2.49e-14 | 22 |