FFCP PHASE1:Hg19::chr3:133969256..133969265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:133969256..133969265,+ | |||
|description=CAGE_peak_at_chr3:133969256..133969265,+ | |description=CAGE_peak_at_chr3:133969256..133969265,+ | ||
|id=chr3:133969256..133969265,+ | |id=chr3:133969256..133969265,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;6.05e-13;1!CL:0002625;6.05e-13;1!CL:0000216;6.05e-13;1!CL:0002545;2.58e-07;2!CL:0000771;4.17e-07;2!CL:0002593;4.17e-07;2!CL:0002367;4.17e-07;2 | |ontology_enrichment_celltype_v019=CL:0000511;6.05e-13;1!CL:0002625;6.05e-13;1!CL:0000216;6.05e-13;1!CL:0002545;2.58e-07;2!CL:0000771;4.17e-07;2!CL:0002593;4.17e-07;2!CL:0002367;4.17e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.76e-13,1;CL:0002625,3.76e-13,1;CL:0000216,3.76e-13,1;CL:0002545,2.28e-07,2;CL:0000771,3.70e-07,2;CL:0002593,4.98e-07,2;CL:0002367,5.28e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.04e-08!84;UBERON:0003914!6.14e-08!118;UBERON:0001981!5.33e-07!60;UBERON:0007500!5.33e-07!60;UBERON:0004537!5.33e-07!60;UBERON:0006965!5.33e-07!60 | |ontology_enrichment_uberon=UBERON:0004872!2.04e-08!84;UBERON:0003914!6.14e-08!118;UBERON:0001981!5.33e-07!60;UBERON:0007500!5.33e-07!60;UBERON:0004537!5.33e-07!60;UBERON:0006965!5.33e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.05e-13;1!UBERON:0001343;6.05e-13;1!UBERON:0004910;6.05e-13;1!UBERON:0004813;6.05e-13;1!UBERON:0005800;2.58e-07;2!UBERON:0001515;2.58e-07;2!UBERON:0004909;4.17e-07;2!UBERON:0005969;4.17e-07;2!UBERON:0002456;4.17e-07;2!UBERON:0003956;4.17e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001136;6.05e-13;1!UBERON:0001343;6.05e-13;1!UBERON:0004910;6.05e-13;1!UBERON:0004813;6.05e-13;1!UBERON:0005800;2.58e-07;2!UBERON:0001515;2.58e-07;2!UBERON:0004909;4.17e-07;2!UBERON:0005969;4.17e-07;2!UBERON:0002456;4.17e-07;2!UBERON:0003956;4.17e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.76e-13,1;UBERON:0001343,3.76e-13,1;UBERON:0004910,3.76e-13,1;UBERON:0005154,3.76e-13,1;UBERON:0005295,3.76e-13,1;UBERON:0004813,3.76e-13,1;UBERON:0005297,3.76e-13,1;UBERON:0005294,3.76e-13,1;UBERON:0010141,3.76e-13,1;UBERON:0005891,3.76e-13,1;UBERON:0005800,2.28e-07,2;UBERON:0001515,2.28e-07,2;UBERON:0004909,3.28e-07,2;UBERON:0002456,4.98e-07,2;UBERON:0005969,5.28e-07,2;UBERON:0003956,5.28e-07,2;UBERON:0004871,9.66e-07,8 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,1.95249646038536,0,2.43042584364528,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.379891534993739,0.132409180813219,0,0,0.560677600142307,2.1349799145941,0.74000264525148,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0.45071417671979,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.57978255948989,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0,0.93733833986777,0.16798212819886,0,0.358234090811393,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,1.06375246633948,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0.179060963239896,0.224170287987055,0.788123040807709,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,1.03985430765404,0,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0.909382714338778,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0.40101294060657,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.976135183992909,0.309123034943167,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.991709492165869,0.576570202095319,0.127612712494584,0.30347334256665,0,0.31481234683064,1.3940745403212,0,0.532306030317022,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0,0.855877976067841,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0,0.35667105148125,0.354761064070598,0,0,0,1.04980416073495,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.278847488557207,0,0.113942055847001,2.3056390438806,0.269272933229316,0.434589487688032,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0.619202951523374,0.611030144933625,0,0,0,0.134802265961354,0,0,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0,5.26131967950724,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0.114536596165916,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.998395002494955,0.429226048136571,0.223171457441873,0,0.720599767084807,0,0.393915911536118,0.0824158583811665,0.0674035438541849,0,0.254019996197353,0,0,0.321506296930038,0.550157746388935,0.415440338029185,0,0,0,0.670869375198532,0.315222829196793,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0.439656701034247,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,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| ||
|short_description=p@chr3:133969256..133969265,+ | |short_description=p@chr3:133969256..133969265,+ | ||
}} | }} |
Latest revision as of 16:03, 29 July 2015
Short description: | p@chr3:133969256..133969265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:133969256..133969265, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.76e-13 | 1 |
seminiferous tubule epithelial cell | 3.76e-13 | 1 |
Sertoli cell | 3.76e-13 | 1 |
thoracic aorta endothelial cell | 2.28e-07 | 2 |
eosinophil | 3.70e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 4.98e-07 | 2 |
trabecular meshwork cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.76e-13 | 1 |
seminiferous tubule of testis | 3.76e-13 | 1 |
epithelium of male gonad | 3.76e-13 | 1 |
epithelial cord | 3.76e-13 | 1 |
sex cord | 3.76e-13 | 1 |
seminiferous tubule epithelium | 3.76e-13 | 1 |
testis sex cord | 3.76e-13 | 1 |
genital ridge | 3.76e-13 | 1 |
primitive sex cord of indifferent gonad | 3.76e-13 | 1 |
coelomic epithelium | 3.76e-13 | 1 |
segment of aorta | 2.28e-07 | 2 |
thoracic aorta | 2.28e-07 | 2 |
epithelium of gonad | 3.28e-07 | 2 |
internal thoracic artery | 4.98e-07 | 2 |
reticulum trabeculare | 5.28e-07 | 2 |
aqueous drainage system | 5.28e-07 | 2 |
somatic layer of lateral plate mesoderm | 9.66e-07 | 8 |