FFCP PHASE1:Hg19::chr4:178231053..178231065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55247 | |EntrezGene=55247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24573 | |HGNC=24573 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAV1 | |UniProt=D6RAV1 | ||
|association_with_transcript=0bp_to_ENST00000513321_5end | |association_with_transcript=0bp_to_ENST00000513321_5end | ||
|cluster_id=chr4:178231053..178231065,+ | |||
|coexpression_cluster_id=C4397 | |coexpression_cluster_id=C4397 | ||
|description=CAGE_peak_2_at_NEIL3_5end | |description=CAGE_peak_2_at_NEIL3_5end | ||
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|ontology_enrichment_celltype=CL:0000012!2.19e-09!682;CL:0000548!3.99e-09!679;CL:0000004!3.99e-09!679;CL:0000255!3.99e-09!679;CL:0000003!1.41e-07!722 | |ontology_enrichment_celltype=CL:0000012!2.19e-09!682;CL:0000548!3.99e-09!679;CL:0000004!3.99e-09!679;CL:0000255!3.99e-09!679;CL:0000003!1.41e-07!722 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!2.79e-36!239;DOID:162!5.34e-36!235;DOID:2531!5.19e-25!51;DOID:0060083!5.19e-25!51;DOID:0050686!3.29e-20!137;DOID:1240!9.15e-20!39;DOID:8692!1.92e-14!31;DOID:0050687!5.61e-12!143;DOID:305!3.47e-10!106;DOID:0060058!1.77e-07!10 | |ontology_enrichment_disease=DOID:14566!2.79e-36!239;DOID:162!5.34e-36!235;DOID:2531!5.19e-25!51;DOID:0060083!5.19e-25!51;DOID:0050686!3.29e-20!137;DOID:1240!9.15e-20!39;DOID:8692!1.92e-14!31;DOID:0050687!5.61e-12!143;DOID:305!3.47e-10!106;DOID:0060058!1.77e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;4.94e-19;51!DOID:0060083;4.94e-19;51!DOID:1240;1.75e-17;39!DOID:8692;5.26e-14;31!DOID:0060058;1.83e-10;10 | |ontology_enrichment_disease_v019=DOID:2531;4.94e-19;51!DOID:0060083;4.94e-19;51!DOID:1240;1.75e-17;39!DOID:8692;5.26e-14;31!DOID:0060058;1.83e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,8.87e-32,51;DOID:0060083,8.87e-32,51;DOID:162,6.95e-24,235;DOID:1240,2.39e-23,39;DOID:14566,9.45e-23,239;DOID:0050686,1.97e-18,137;DOID:8692,5.00e-15,31;DOID:0060058,1.68e-10,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,2.00e-07,19 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.861847406537515,0.612002073732759,0,3.43483184557268,1.91624195102038,1.00434111675842,0.764134057479513,1.31360943119913,0.865818594450472,0,0,0,0,0,0,5.42270404062111,9.66750780914466,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.31692042387539,0,0,0,1.33749196312542,0,0,0,1.6711568532776,0.294605907474837,0.221533894583621,0.270803863765016,2.68991771423918,2.21100890851793,1.97325485524411,1.38175008892924,1.73881851441031,0,0,0,1.92625882585863,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0,0,0,0.639312809217652,3.61439152384566,0,0.289693037921647,1.5905718941022,0,2.17430079477356,0.443458794925128,0.87834785693126,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0,0,1.6507082516404,1.04497483268405,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0.892997282840798,1.57170560838319,1.0135033243499,1.53316637465883,0,0.366403487860815,0,0,0,0,0.759783069987479,0.132409180813219,1.72101972449288,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,1.87895197830024,2.5899671098901,2.10676210053373,0.204154171254893,0.982674538494144,0.103325781175765,0,0.494533858557114,0,0,1.68336113954066,1.37630371859161,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0.680593098960126,1.4351170855109,0,0.423863802319124,3.00091096084402,1.03052529238439,1.03056216018252,0.558350568994769,2.02531598689519,1.36411807225678,1.00973509697646,0.184099797284599,0.323292113637624,1.42003837006646,1.71278566986988,0.847802961552438,0.193260853163297,0.818238361772504,0,0.365921118388786,0.397589304964456,0.232387885739037,0.414644220061482,0.756962552626885,0,0,0,0,0,0,1.65629520055781,1.85443159085912,1.44606617930089,1.10293972732394,1.74303555273925,1.42362371466658,0.539325232640658,1.17732879075208,1.53898862778556,0.738155454624648,0,0,0,0,0,0,10.153651286537,0.491953754172454,0.686271241194102,0,0,0.703702806881416,0,0,0,2.88662684050547,0.34779121492523,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0.858486162094873,0.246217006087397,0,1.33768046059855,0,0,0.283550194484773,1.16426079513703,0.871901815541886,1.15014803749563,0.492663237895943,0.44024217006613,0,0,0,1.65094525159639,1.52795370223311,0,0,0.925447434329912,2.40274446275134,0,1.23344192779897,1.30788020649984,1.54010400223995,0,0,0,0.26593811658487,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,0,0,0.823240336780769,0.65147236858747,0,1.58390374586686,0,0,0,0,0,0,1.67737398844108,0,1.42636905040718,1.01346914667305,0.61642896765115,0.537182889719687,18.494048758932,0,0,0,1.01637849688985,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.315404830067869,0.819989904948992,0,0,0,0,0.184369168541703,0.955719759148911,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0.460385919864187,0.280660094433074,0.384417447767103,0,0.160853921143607,0,1.23367755042124,0.355123450626254,0.492762936082855,0,0.929683027679674,0.362578348774867,0,0,2.06666006696292,0.910455840033585,0.262248829918848,0,0.539107359730903,0,1.46139224653261,0.422206515571503,0,0.170093705276516,0.863663664408557,0,0.270946437543853,0,1.52925763827023,0,0.447749509444357,0.438519753291869,1.0457418040996,0.769350375349168,0.656029291399411,0,0,3.66277859273374,3.05285149706176,0,0,1.6068392984416,0.193341436584244,1.07834031980251,0.921022048356777,1.37836572484531,0.644521469209642,0.870100163485371,0.93749290157711,0.623224249527161,0,0.384380134730212,0.382838137483752,0,0,0.62962469366128,0,0,0,1.73986598415015,0,0.286249773483982,0.744316738719335,0.632758849437452,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.942499218765491,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0.682499557039929,0.282810863907425,2.26016233240486,0,0.66343897524122,0,0,0,0,0.30982349809975,0.563391205064483,0.717056761020258,0.392996164052485,0,0,0,0,0,0.699869440489966,0.384888450902048,0,1.08890984861323,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.854592569019785,0,2.20536194382929,4.83088255326869,3.17392268548179,15.7934892233479,2.8696729091188,0.997896857164083,2.10655907145603,1.48171507906718,1.29848776109822,2.24637742490767,0.912938716132769,16.9214287434865,2.50634477090067,0.846458889008016,7.70822760497758,7.87018858045086,15.3304645568517,6.18309620560377,9.21722292925374,7.38131156044973,6.17341824334061,6.64319524366937,2.22724939116194,2.46174797895425,1.89318974933188,2.33150377598474,0,0,0,0.728163130497081,7.35526336231357,1.13654458722565,0,0,0,0,0,0.222617410045812,4.94411622680279,0.844501632511974,0,3.31540698637377,0,0.409074730008619,0.738508832766417,0,1.70749867179921,2.32727527078292,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| ||
|short_description=p2@NEIL3 | |short_description=p2@NEIL3 | ||
}} | }} |
Latest revision as of 22:55, 16 September 2015
Short description: | p2@NEIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEIL3_5end |
Coexpression cluster: | C4397_acute_chronic_NK_Hodgkin_thymus_glioblastoma_non |
Association with transcript: | 0bp_to_ENST00000513321_5end |
EntrezGene: | NEIL3 |
HGNC: | 24573 |
UniProt: | D6RAV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 2.00e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.87e-32 | 51 |
immune system cancer | 8.87e-32 | 51 |
cancer | 6.95e-24 | 235 |
leukemia | 2.39e-23 | 39 |
disease of cellular proliferation | 9.45e-23 | 239 |
organ system cancer | 1.97e-18 | 137 |
myeloid leukemia | 5.00e-15 | 31 |
lymphoma | 1.68e-10 | 10 |