FFCP PHASE1:Hg19::chr1:85155993..85156003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117178 | |EntrezGene=117178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16509 | |HGNC=16509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000481102_5end | |association_with_transcript=-6bp_to_ENST00000481102_5end | ||
|cluster_id=chr1:85155993..85156003,- | |||
|description=CAGE_peak_10_at_SSX2IP_5end | |description=CAGE_peak_10_at_SSX2IP_5end | ||
|id=chr1:85155993..85156003,- | |id=chr1:85155993..85156003,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.25e-14;10!UBERON:0005564;3.25e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.25e-14;10!UBERON:0005564;3.25e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.94e-17!32;UBERON:0001893!6.92e-17!34;UBERON:0000955!1.37e-16!69;UBERON:0006238!1.37e-16!69;UBERON:0002020!1.67e-16!34;UBERON:0003528!1.67e-16!34;UBERON:0003075!5.45e-16!86;UBERON:0007284!5.45e-16!86;UBERON:0002791!7.28e-16!33;UBERON:0002346!1.49e-15!90;UBERON:0002780!3.30e-15!41;UBERON:0001890!3.30e-15!41;UBERON:0006240!3.30e-15!41;UBERON:0001049!4.00e-15!57;UBERON:0005068!4.00e-15!57;UBERON:0006241!4.00e-15!57;UBERON:0007135!4.00e-15!57;UBERON:0001017!1.15e-14!82;UBERON:0003056!1.15e-14!61;UBERON:0003080!1.22e-14!42;UBERON:0002616!2.96e-14!59;UBERON:0005743!3.20e-14!86;UBERON:0000956!5.76e-14!25;UBERON:0000203!5.76e-14!25;UBERON:0000033!1.22e-13!123;UBERON:0000073!3.61e-13!94;UBERON:0001016!3.61e-13!94;UBERON:0000153!7.51e-13!129;UBERON:0007811!7.51e-13!129;UBERON:0002619!1.47e-11!22;UBERON:0001950!2.79e-11!20;UBERON:0004121!3.54e-11!169;UBERON:0000924!4.34e-11!173;UBERON:0006601!4.34e-11!173;UBERON:0000064!1.14e-07!219 | |ontology_enrichment_uberon=UBERON:0001869!5.94e-17!32;UBERON:0001893!6.92e-17!34;UBERON:0000955!1.37e-16!69;UBERON:0006238!1.37e-16!69;UBERON:0002020!1.67e-16!34;UBERON:0003528!1.67e-16!34;UBERON:0003075!5.45e-16!86;UBERON:0007284!5.45e-16!86;UBERON:0002791!7.28e-16!33;UBERON:0002346!1.49e-15!90;UBERON:0002780!3.30e-15!41;UBERON:0001890!3.30e-15!41;UBERON:0006240!3.30e-15!41;UBERON:0001049!4.00e-15!57;UBERON:0005068!4.00e-15!57;UBERON:0006241!4.00e-15!57;UBERON:0007135!4.00e-15!57;UBERON:0001017!1.15e-14!82;UBERON:0003056!1.15e-14!61;UBERON:0003080!1.22e-14!42;UBERON:0002616!2.96e-14!59;UBERON:0005743!3.20e-14!86;UBERON:0000956!5.76e-14!25;UBERON:0000203!5.76e-14!25;UBERON:0000033!1.22e-13!123;UBERON:0000073!3.61e-13!94;UBERON:0001016!3.61e-13!94;UBERON:0000153!7.51e-13!129;UBERON:0007811!7.51e-13!129;UBERON:0002619!1.47e-11!22;UBERON:0001950!2.79e-11!20;UBERON:0004121!3.54e-11!169;UBERON:0000924!4.34e-11!173;UBERON:0006601!4.34e-11!173;UBERON:0000064!1.14e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.70e-17;8!UBERON:0003135;5.10e-13;11!UBERON:0002021;6.33e-08;5!UBERON:0000991;2.77e-07;21!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.70e-17;8!UBERON:0003135;5.10e-13;11!UBERON:0002021;6.33e-08;5!UBERON:0000991;2.77e-07;21!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.44e-17,8;UBERON:0003135,4.52e-13,11;UBERON:0002021,6.55e-08,5;UBERON:0000991,2.60e-07,21;UBERON:0009196,2.60e-07,21;UBERON:0009117,2.60e-07,21;UBERON:0005564,2.60e-07,21;UBERON:0004176,5.09e-07,22;UBERON:0003101,5.09e-07,22;UBERON:0000079,5.09e-07,22 | |||
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| ||
|short_description=p10@SSX2IP | |short_description=p10@SSX2IP | ||
}} | }} |
Latest revision as of 12:27, 19 September 2015
Short description: | p10@SSX2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SSX2IP_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000481102_5end |
EntrezGene: | SSX2IP |
HGNC: | 16509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.44e-17 | 8 |
male reproductive organ | 4.52e-13 | 11 |
occipital lobe | 6.55e-08 | 5 |
gonad | 2.60e-07 | 21 |
indifferent external genitalia | 2.60e-07 | 21 |
indifferent gonad | 2.60e-07 | 21 |
gonad primordium | 2.60e-07 | 21 |
external genitalia | 5.09e-07 | 22 |
male organism | 5.09e-07 | 22 |
male reproductive system | 5.09e-07 | 22 |