FFCP PHASE1:Hg19::chr14:71276610..71276625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-296bp_to_ENST00000554032_5end | |association_with_transcript=-296bp_to_ENST00000554032_5end | ||
|cluster_id=chr14:71276610..71276625,+ | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_2_at_ENST00000554032_5end | |description=CAGE_peak_2_at_ENST00000554032_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.53e-28!254;CL:0002076!8.58e-12!43;CL:0000223!4.11e-09!59;CL:0002368!5.16e-07!13;CL:0002251!7.14e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.53e-28!254;CL:0002076!8.58e-12!43;CL:0000223!4.11e-09!59;CL:0002368!5.16e-07!13;CL:0002251!7.14e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.02e-14;13!CL:0002681;1.91e-10;12!CL:0002584;1.91e-10;12!CL:1000449;2.24e-10;15!CL:1000507;6.98e-10;10!CL:1000494;6.98e-10;10!CL:0000244;5.06e-09;4!CL:0000731;5.06e-09;4!CL:1000497;6.23e-09;17!CL:0002518;6.23e-09;17!CL:0002076;1.32e-08;42!CL:0002202;2.53e-08;9!CL:0002632;2.53e-08;9!CL:0000307;2.79e-07;3!CL:0000239;7.33e-07;3!CL:1000615;7.33e-07;3!CL:0002306;7.33e-07;3 | |ontology_enrichment_celltype_v019=CL:0002368;1.02e-14;13!CL:0002681;1.91e-10;12!CL:0002584;1.91e-10;12!CL:1000449;2.24e-10;15!CL:1000507;6.98e-10;10!CL:1000494;6.98e-10;10!CL:0000244;5.06e-09;4!CL:0000731;5.06e-09;4!CL:1000497;6.23e-09;17!CL:0002518;6.23e-09;17!CL:0002076;1.32e-08;42!CL:0002202;2.53e-08;9!CL:0002632;2.53e-08;9!CL:0000307;2.79e-07;3!CL:0000239;7.33e-07;3!CL:1000615;7.33e-07;3!CL:0002306;7.33e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.22e-20,253;CL:0002368,5.28e-15,13;CL:0002076,3.82e-12,42;CL:0002681,1.57e-10,12;CL:0002584,1.57e-10,12;CL:1000449,1.73e-10,15;CL:1000507,3.38e-10,10;CL:1000494,3.38e-10,10;CL:0000244,4.02e-09,4;CL:0000731,4.02e-09,4;CL:1000497,4.98e-09,17;CL:0002518,4.98e-09,17;CL:0002202,1.47e-08,9;CL:0002632,1.47e-08,9;CL:0000223,1.66e-08,58;CL:0000239,2.26e-07,3;CL:1000615,2.26e-07,3;CL:0002306,2.26e-07,3;CL:0000068,3.06e-07,3;CL:0000069,3.06e-07,3;CL:0000307,3.06e-07,3;CL:0000377,3.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.79e-07;3 | |ontology_enrichment_development_v019=CL:0000377;2.79e-07;3 | ||
|ontology_enrichment_disease=DOID:305!2.86e-19!106;DOID:0050687!5.21e-19!143;DOID:162!3.24e-15!235;DOID:14566!4.84e-15!239;DOID:1749!4.16e-10!14 | |ontology_enrichment_disease=DOID:305!2.86e-19!106;DOID:0050687!5.21e-19!143;DOID:162!3.24e-15!235;DOID:14566!4.84e-15!239;DOID:1749!4.16e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.38e-13;14 | |ontology_enrichment_disease_v019=DOID:1749;1.38e-13;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.26e-14,14;DOID:305,2.94e-09,106;DOID:0050687,7.79e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!4.68e-13!173;UBERON:0006601!4.68e-13!173;UBERON:0004121!1.00e-12!169;UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!1.52e-12!123;UBERON:0000064!7.81e-12!219;UBERON:0002346!1.29e-10!90;UBERON:0003075!2.39e-10!86;UBERON:0007284!2.39e-10!86;UBERON:0001049!2.55e-10!57;UBERON:0005068!2.55e-10!57;UBERON:0006241!2.55e-10!57;UBERON:0007135!2.55e-10!57;UBERON:0003056!2.88e-10!61;UBERON:0001017!6.75e-10!82;UBERON:0000073!1.43e-09!94;UBERON:0001016!1.43e-09!94;UBERON:0000955!2.04e-09!69;UBERON:0006238!2.04e-09!69;UBERON:0005743!5.02e-09!86;UBERON:0002616!1.07e-08!59;UBERON:0004119!2.05e-08!169;UBERON:0000925!2.05e-08!169;UBERON:0006595!2.05e-08!169;UBERON:0002780!2.20e-08!41;UBERON:0001890!2.20e-08!41;UBERON:0006240!2.20e-08!41;UBERON:0003080!6.07e-08!42;UBERON:0001869!4.54e-07!32 | |ontology_enrichment_uberon=UBERON:0000924!4.68e-13!173;UBERON:0006601!4.68e-13!173;UBERON:0004121!1.00e-12!169;UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!1.52e-12!123;UBERON:0000064!7.81e-12!219;UBERON:0002346!1.29e-10!90;UBERON:0003075!2.39e-10!86;UBERON:0007284!2.39e-10!86;UBERON:0001049!2.55e-10!57;UBERON:0005068!2.55e-10!57;UBERON:0006241!2.55e-10!57;UBERON:0007135!2.55e-10!57;UBERON:0003056!2.88e-10!61;UBERON:0001017!6.75e-10!82;UBERON:0000073!1.43e-09!94;UBERON:0001016!1.43e-09!94;UBERON:0000955!2.04e-09!69;UBERON:0006238!2.04e-09!69;UBERON:0005743!5.02e-09!86;UBERON:0002616!1.07e-08!59;UBERON:0004119!2.05e-08!169;UBERON:0000925!2.05e-08!169;UBERON:0006595!2.05e-08!169;UBERON:0002780!2.20e-08!41;UBERON:0001890!2.20e-08!41;UBERON:0006240!2.20e-08!41;UBERON:0003080!6.07e-08!42;UBERON:0001869!4.54e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.02e-11;30!UBERON:0001008;6.02e-11;30!UBERON:0001225;1.91e-10;12!UBERON:0008987;1.91e-10;12!UBERON:0006555;2.24e-10;15!UBERON:0004819;2.24e-10;15!UBERON:0001285;2.24e-10;15!UBERON:0007684;2.24e-10;15!UBERON:0001851;3.86e-10;15!UBERON:0004211;6.98e-10;10!UBERON:0009773;6.98e-10;10!UBERON:0001231;6.98e-10;10!UBERON:0004810;6.98e-10;10!UBERON:0000353;4.73e-08;15!UBERON:0002294;1.28e-07;7!UBERON:0001173;1.28e-07;7!UBERON:0000365;3.34e-07;5!UBERON:0002113;3.67e-07;24!UBERON:0011143;3.67e-07;24!UBERON:0006853;7.33e-07;3!UBERON:0007685;7.33e-07;3!UBERON:0004134;7.33e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0006554;6.02e-11;30!UBERON:0001008;6.02e-11;30!UBERON:0001225;1.91e-10;12!UBERON:0008987;1.91e-10;12!UBERON:0006555;2.24e-10;15!UBERON:0004819;2.24e-10;15!UBERON:0001285;2.24e-10;15!UBERON:0007684;2.24e-10;15!UBERON:0001851;3.86e-10;15!UBERON:0004211;6.98e-10;10!UBERON:0009773;6.98e-10;10!UBERON:0001231;6.98e-10;10!UBERON:0004810;6.98e-10;10!UBERON:0000353;4.73e-08;15!UBERON:0002294;1.28e-07;7!UBERON:0001173;1.28e-07;7!UBERON:0000365;3.34e-07;5!UBERON:0002113;3.67e-07;24!UBERON:0011143;3.67e-07;24!UBERON:0006853;7.33e-07;3!UBERON:0007685;7.33e-07;3!UBERON:0004134;7.33e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,1.57e-10,12;UBERON:0008987,1.57e-10,12;UBERON:0004211,1.73e-10,15;UBERON:0009773,1.73e-10,15;UBERON:0001231,1.73e-10,15;UBERON:0001285,1.73e-10,15;UBERON:0007684,1.73e-10,15;UBERON:0004208,1.73e-10,15;UBERON:0001851,2.10e-10,15;UBERON:0004810,3.38e-10,10;UBERON:0006555,1.03e-09,16;UBERON:0004819,1.03e-09,16;UBERON:0006554,2.17e-09,47;UBERON:0001008,4.18e-09,48;UBERON:0000353,4.05e-08,15;UBERON:0006853,2.26e-07,3;UBERON:0007685,2.26e-07,3;UBERON:0004134,2.26e-07,3;UBERON:0000365,2.79e-07,5 | |||
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| ||
|short_description=p2@ENST00000554032 | |short_description=p2@ENST00000554032 | ||
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Latest revision as of 22:24, 24 July 2015
Short description: | p2@ENST00000554032 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000554032_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -296bp_to_ENST00000554032_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.22e-20 | 253 |
respiratory epithelial cell | 5.28e-15 | 13 |
endo-epithelial cell | 3.82e-12 | 42 |
kidney cortical cell | 1.57e-10 | 12 |
renal cortical epithelial cell | 1.57e-10 | 12 |
epithelial cell of nephron | 1.73e-10 | 15 |
kidney tubule cell | 3.38e-10 | 10 |
nephron tubule epithelial cell | 3.38e-10 | 10 |
transitional epithelial cell | 4.02e-09 | 4 |
urothelial cell | 4.02e-09 | 4 |
kidney cell | 4.98e-09 | 17 |
kidney epithelial cell | 4.98e-09 | 17 |
epithelial cell of tracheobronchial tree | 1.47e-08 | 9 |
epithelial cell of lower respiratory tract | 1.47e-08 | 9 |
endodermal cell | 1.66e-08 | 58 |
brush border epithelial cell | 2.26e-07 | 3 |
kidney cortex tubule cell | 2.26e-07 | 3 |
epithelial cell of proximal tubule | 2.26e-07 | 3 |
duct epithelial cell | 3.06e-07 | 3 |
branched duct epithelial cell | 3.06e-07 | 3 |
tracheal epithelial cell | 3.06e-07 | 3 |
tracheoblast | 3.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 1.57e-10 | 12 |
renal parenchyma | 1.57e-10 | 12 |
nephron epithelium | 1.73e-10 | 15 |
renal tubule | 1.73e-10 | 15 |
nephron tubule | 1.73e-10 | 15 |
nephron | 1.73e-10 | 15 |
uriniferous tubule | 1.73e-10 | 15 |
nephrogenic mesenchyme | 1.73e-10 | 15 |
cortex | 2.10e-10 | 15 |
nephron tubule epithelium | 3.38e-10 | 10 |
excretory tube | 1.03e-09 | 16 |
kidney epithelium | 1.03e-09 | 16 |
urinary system structure | 2.17e-09 | 47 |
renal system | 4.18e-09 | 48 |
parenchyma | 4.05e-08 | 15 |
renal cortex tubule | 2.26e-07 | 3 |
region of nephron tubule | 2.26e-07 | 3 |
proximal tubule | 2.26e-07 | 3 |
urothelium | 2.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.26e-14 | 14 |
carcinoma | 2.94e-09 | 106 |
cell type cancer | 7.79e-07 | 143 |