FFCP PHASE1:Hg19::chr2:79347577..79347592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5967 | |EntrezGene=5967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9951 | |HGNC=9951 | ||
|TSSclassifier=strong | |||
|UniProt=P05451,A8K7G6,Q4ZG28 | |UniProt=P05451,A8K7G6,Q4ZG28 | ||
|association_with_transcript=0bp_to_ENST00000233735,NM_002909,uc002snz.2,uc010ffx.1_5end | |association_with_transcript=0bp_to_ENST00000233735,NM_002909,uc002snz.2,uc010ffx.1_5end | ||
|cluster_id=chr2:79347577..79347592,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_2_at_REG1A_5end | |description=CAGE_peak_2_at_REG1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.97e-14;1!UBERON:0001045;1.97e-14;1!UBERON:0006242;2.94e-14;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.97e-14;1!UBERON:0001045;1.97e-14;1!UBERON:0006242;2.94e-14;1 | ||
|ontology_enrichment_disease=DOID:178!5.79e-08!1;DOID:326!5.79e-08!1;DOID:3978!5.79e-08!1;DOID:3394!5.79e-08!1;DOID:5844!5.79e-08!1 | |ontology_enrichment_disease=DOID:178!5.79e-08!1;DOID:326!5.79e-08!1;DOID:3978!5.79e-08!1;DOID:3394!5.79e-08!1;DOID:5844!5.79e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.11e-14!35;UBERON:0007023!1.23e-11!115;UBERON:0000160!2.31e-11!27;UBERON:0001154!3.34e-08!1;UBERON:0001153!3.34e-08!1;UBERON:0007029!5.05e-08!1;UBERON:0002363!9.94e-08!1;UBERON:0007647!9.94e-08!1;UBERON:0010115!9.94e-08!1;UBERON:0002108!1.24e-07!14;UBERON:0001155!1.75e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!5.11e-14!35;UBERON:0007023!1.23e-11!115;UBERON:0000160!2.31e-11!27;UBERON:0001154!3.34e-08!1;UBERON:0001153!3.34e-08!1;UBERON:0007029!5.05e-08!1;UBERON:0002363!9.94e-08!1;UBERON:0007647!9.94e-08!1;UBERON:0010115!9.94e-08!1;UBERON:0002108!1.24e-07!14;UBERON:0001155!1.75e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.44e-20;22!UBERON:0000160;1.40e-18;17!UBERON:0001154;1.97e-14;1!UBERON:0001153;1.97e-14;1!UBERON:0009854;1.97e-14;1!UBERON:0001155;6.59e-14;9!UBERON:0004921;3.39e-12;33!UBERON:0002108;7.88e-12;4!UBERON:0000059;1.73e-11;11!UBERON:0001555;9.34e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0005409;1.44e-20;22!UBERON:0000160;1.40e-18;17!UBERON:0001154;1.97e-14;1!UBERON:0001153;1.97e-14;1!UBERON:0009854;1.97e-14;1!UBERON:0001155;6.59e-14;9!UBERON:0004921;3.39e-12;33!UBERON:0002108;7.88e-12;4!UBERON:0000059;1.73e-11;11!UBERON:0001555;9.34e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.38e-18,17;UBERON:0005409,3.70e-18,25;UBERON:0001154,1.84e-14,1;UBERON:0001153,1.84e-14,1;UBERON:0001045,1.84e-14,1;UBERON:0001155,6.45e-14,9;UBERON:0002108,7.88e-12,4;UBERON:0000059,1.70e-11,11 | |||
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|short_description=p2@REG1A | |short_description=p2@REG1A | ||
}} | }} |
Latest revision as of 13:46, 18 September 2015
Short description: | p2@REG1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REG1A_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000233735, NM_002909, uc002snz.2, uc010ffx.1_5end |
EntrezGene: | REG1A |
HGNC: | 9951 |
UniProt: | P05451A8K7G6Q4ZG28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.38e-18 | 17 |
gastrointestinal system | 3.70e-18 | 25 |
vermiform appendix | 1.84e-14 | 1 |
caecum | 1.84e-14 | 1 |
midgut | 1.84e-14 | 1 |
colon | 6.45e-14 | 9 |
small intestine | 7.88e-12 | 4 |
large intestine | 1.70e-11 | 11 |