FFCP PHASE1:Hg19::chr1:44889697..44889716,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:44889697..44889716,+
|short_description=p11@RNF220
|description=CAGE_peak_11_at_RNF220_5end
|association_with_transcript=0bp_to_ENST00000443020_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55182 | |EntrezGene=55182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25552 | |HGNC=25552 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLZ9 | |UniProt=B4DLZ9 | ||
|association_with_transcript=0bp_to_ENST00000443020_5end | |||
|cluster_id=chr1:44889697..44889716,+ | |||
|coexpression_cluster_id=C3618 | |||
|description=CAGE_peak_11_at_RNF220_5end | |||
|id=chr1:44889697..44889716,+ | |||
|ontology_enrichment_celltype=CL:0002623!4.28e-08!3;CL:0002605!5.43e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.41e-12;3!CL:0000037;2.84e-10;1!CL:0001024;2.84e-10;1!CL:0002032;3.25e-10;1!CL:0000557;3.25e-10;1!CL:0000319;8.61e-10;1!CL:0000622;6.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.41e-12,3;CL:0001024,2.84e-10,1;CL:0000319,8.99e-10,1;CL:0000622,6.77e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.61e-10;1!DOID:9119;8.61e-10;1!DOID:5662;8.61e-10;1!DOID:8692;1.12e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.24e-10,31;DOID:5662,7.55e-10,1;DOID:9119,8.24e-10,1;DOID:3030,8.99e-10,1;DOID:1240,8.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.55e-35!41;UBERON:0001890!1.55e-35!41;UBERON:0006240!1.55e-35!41;UBERON:0003080!1.63e-34!42;UBERON:0000955!7.14e-34!69;UBERON:0006238!7.14e-34!69;UBERON:0001893!7.66e-32!34;UBERON:0002791!3.45e-30!33;UBERON:0001017!1.01e-28!82;UBERON:0005743!1.20e-28!86;UBERON:0001869!2.48e-28!32;UBERON:0002616!5.78e-28!59;UBERON:0001049!3.08e-27!57;UBERON:0005068!3.08e-27!57;UBERON:0006241!3.08e-27!57;UBERON:0007135!3.08e-27!57;UBERON:0002020!2.01e-26!34;UBERON:0003528!2.01e-26!34;UBERON:0000956!4.56e-25!25;UBERON:0000203!4.56e-25!25;UBERON:0000073!5.76e-25!94;UBERON:0001016!5.76e-25!94;UBERON:0003056!3.08e-23!61;UBERON:0000033!7.58e-21!123;UBERON:0002619!1.56e-19!22;UBERON:0000153!2.28e-19!129;UBERON:0007811!2.28e-19!129;UBERON:0001950!4.63e-19!20;UBERON:0003075!5.66e-18!86;UBERON:0007284!5.66e-18!86;UBERON:0002346!8.46e-17!90;UBERON:0007023!3.76e-15!115;UBERON:0004121!8.49e-14!169;UBERON:0000924!3.14e-13!173;UBERON:0006601!3.14e-13!173;UBERON:0000200!1.03e-09!6;UBERON:0001872!5.47e-08!5;UBERON:0002771!6.40e-08!3;UBERON:0001871!2.60e-07!7;UBERON:0000025!7.04e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;8.61e-10;1!UBERON:0002371;4.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.07e-09,1 | |||
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| ||
|short_description=p11@RNF220 | |||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p11@RNF220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RNF220_5end |
Coexpression cluster: | C3618_acute_granulocyte_CD133_CD34_renal_Dendritic_chronic |
Association with transcript: | 0bp_to_ENST00000443020_5end |
EntrezGene: | RNF220 |
HGNC: | 25552 |
UniProt: | B4DLZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.41e-12 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.84e-10 | 1 |
mucus secreting cell | 8.99e-10 | 1 |
acinar cell | 6.77e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.07e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.24e-10 | 31 |
pleomorphic carcinoma | 7.55e-10 | 1 |
acute myeloid leukemia | 8.24e-10 | 1 |
mucinous adenocarcinoma | 8.99e-10 | 1 |
leukemia | 8.60e-08 | 39 |