FFCP PHASE1:Hg19::chr10:50911313..50911330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:50911313..50911330,- | |||
|coexpression_cluster_id=C200 | |coexpression_cluster_id=C200 | ||
|description=CAGE_peak_at_chr10:50911313..50911330,- | |description=CAGE_peak_at_chr10:50911313..50911330,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000192!1.78e-07!42;CL:0000514!1.78e-07!42;CL:0000359!9.72e-07!32 | |ontology_enrichment_celltype=CL:0000192!1.78e-07!42;CL:0000514!1.78e-07!42;CL:0000359!9.72e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.30e-08;32 | |ontology_enrichment_celltype_v019=CL:0000359;5.30e-08;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.63e-08,32;CL:0000192,5.91e-08,43;CL:0000514,5.91e-08,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.41e-07!659;UBERON:0000486!2.45e-07!82;UBERON:0003914!2.96e-07!118;UBERON:0001637!3.01e-07!42;UBERON:0003509!3.01e-07!42;UBERON:0004572!3.01e-07!42;UBERON:0003081!3.33e-07!216;UBERON:0004290!4.99e-07!70;UBERON:0004872!5.50e-07!84;UBERON:0004535!9.25e-07!110 | |ontology_enrichment_uberon=UBERON:0000468!1.41e-07!659;UBERON:0000486!2.45e-07!82;UBERON:0003914!2.96e-07!118;UBERON:0001637!3.01e-07!42;UBERON:0003509!3.01e-07!42;UBERON:0004572!3.01e-07!42;UBERON:0003081!3.33e-07!216;UBERON:0004290!4.99e-07!70;UBERON:0004872!5.50e-07!84;UBERON:0004535!9.25e-07!110 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.98e-08,117;UBERON:0004872,9.50e-08,83;UBERON:0001637,1.30e-07,42;UBERON:0003509,1.30e-07,42;UBERON:0004572,1.30e-07,42;UBERON:0007503,1.37e-07,78;UBERON:0005256,1.46e-07,122;UBERON:0003104,1.72e-07,160;UBERON:0009142,1.72e-07,160;UBERON:0007500,2.83e-07,59;UBERON:0001981,2.83e-07,59;UBERON:0004537,2.83e-07,59;UBERON:0006965,2.83e-07,59;UBERON:0000926,7.37e-07,315;UBERON:0004120,7.37e-07,315;UBERON:0006603,7.37e-07,315;UBERON:0000486,8.40e-07,83 | |||
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| ||
|short_description=p@chr10:50911313..50911330,- | |short_description=p@chr10:50911313..50911330,- | ||
}} | }} |
Latest revision as of 14:02, 23 July 2015
Short description: | p@chr10:50911313..50911330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:50911313..50911330, - |
Coexpression cluster: | C200_seminal_Cardiac_Smooth_Hair_submaxillary_Neutrophils_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.63e-08 | 32 |
smooth muscle cell | 5.91e-08 | 43 |
smooth muscle myoblast | 5.91e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.98e-08 | 117 |
splanchnic layer of lateral plate mesoderm | 9.50e-08 | 83 |
artery | 1.30e-07 | 42 |
arterial blood vessel | 1.30e-07 | 42 |
arterial system | 1.30e-07 | 42 |
epithelial vesicle | 1.37e-07 | 78 |
trunk mesenchyme | 1.46e-07 | 122 |
mesenchyme | 1.72e-07 | 160 |
entire embryonic mesenchyme | 1.72e-07 | 160 |
epithelial tube open at both ends | 2.83e-07 | 59 |
blood vessel | 2.83e-07 | 59 |
blood vasculature | 2.83e-07 | 59 |
vascular cord | 2.83e-07 | 59 |
mesoderm | 7.37e-07 | 315 |
mesoderm-derived structure | 7.37e-07 | 315 |
presumptive mesoderm | 7.37e-07 | 315 |
multilaminar epithelium | 8.40e-07 | 83 |