FFCP PHASE1:Hg19::chrX:64887471..64887498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4478 | |EntrezGene=4478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7373 | |HGNC=7373 | ||
|TSSclassifier=strong | |||
|UniProt=P26038 | |UniProt=P26038 | ||
|association_with_transcript=-12bp_to_NM_002444,uc004dwf.2_5end | |association_with_transcript=-12bp_to_NM_002444,uc004dwf.2_5end | ||
|cluster_id=chrX:64887471..64887498,+ | |||
|description=CAGE_peak_2_at_MSN_5end | |description=CAGE_peak_2_at_MSN_5end | ||
|id=chrX:64887471..64887498,+ | |id=chrX:64887471..64887498,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.41e-12!180;CL:0000222!5.95e-12!119;CL:0002078!4.46e-08!44;CL:0002321!7.89e-08!248;CL:0000115!1.13e-07!35;CL:0000220!2.74e-07!246;CL:0000183!3.03e-07!59;CL:0002139!7.07e-07!24;CL:0000393!7.98e-07!60;CL:0000211!7.98e-07!60 | |ontology_enrichment_celltype=CL:0000055!5.41e-12!180;CL:0000222!5.95e-12!119;CL:0002078!4.46e-08!44;CL:0002321!7.89e-08!248;CL:0000115!1.13e-07!35;CL:0000220!2.74e-07!246;CL:0000183!3.03e-07!59;CL:0002139!7.07e-07!24;CL:0000393!7.98e-07!60;CL:0000211!7.98e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.61e-07;24!CL:0000115;9.32e-07;36 | |ontology_enrichment_celltype_v019=CL:0002139;4.61e-07;24!CL:0000115;9.32e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.27e-12,121;CL:0002321,2.35e-08,250;CL:0002078,4.48e-08,45;CL:0000115,1.18e-07,36;CL:0000393,3.43e-07,61;CL:0000211,3.43e-07,61;CL:0002139,7.00e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.01e-12!79;UBERON:0007798!1.01e-12!79;UBERON:0000055!2.27e-09!69;UBERON:0004535!1.51e-08!110;UBERON:0001009!3.79e-08!113;UBERON:0001981!5.75e-08!60;UBERON:0007500!5.75e-08!60;UBERON:0004537!5.75e-08!60;UBERON:0006965!5.75e-08!60 | |ontology_enrichment_uberon=UBERON:0002049!1.01e-12!79;UBERON:0007798!1.01e-12!79;UBERON:0000055!2.27e-09!69;UBERON:0004535!1.51e-08!110;UBERON:0001009!3.79e-08!113;UBERON:0001981!5.75e-08!60;UBERON:0007500!5.75e-08!60;UBERON:0004537!5.75e-08!60;UBERON:0006965!5.75e-08!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0002104;8.00e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0002104;8.00e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,3.74e-13,78;UBERON:0007798,3.74e-13,78;UBERON:0000055,9.55e-10,68;UBERON:0004535,9.88e-09,109;UBERON:0007500,2.49e-08,59;UBERON:0001981,2.49e-08,59;UBERON:0004537,2.49e-08,59;UBERON:0006965,2.49e-08,59;UBERON:0001009,2.53e-08,112;UBERON:0007503,4.21e-07,78 | |||
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| ||
|short_description=p2@MSN | |short_description=p2@MSN | ||
}} | }} |
Latest revision as of 04:17, 16 September 2015
Short description: | p2@MSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSN_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_NM_002444, uc004dwf.2_5end |
EntrezGene: | MSN |
HGNC: | 7373 |
UniProt: | P26038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.27e-12 | 121 |
embryonic cell | 2.35e-08 | 250 |
meso-epithelial cell | 4.48e-08 | 45 |
endothelial cell | 1.18e-07 | 36 |
electrically responsive cell | 3.43e-07 | 61 |
electrically active cell | 3.43e-07 | 61 |
endothelial cell of vascular tree | 7.00e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
vasculature | 3.74e-13 | 78 |
vascular system | 3.74e-13 | 78 |
vessel | 9.55e-10 | 68 |
cardiovascular system | 9.88e-09 | 109 |
epithelial tube open at both ends | 2.49e-08 | 59 |
blood vessel | 2.49e-08 | 59 |
blood vasculature | 2.49e-08 | 59 |
vascular cord | 2.49e-08 | 59 |
circulatory system | 2.53e-08 | 112 |
epithelial vesicle | 4.21e-07 | 78 |