FFCP PHASE1:Hg19::chr1:53387386..53387453,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:53387386..53387453,-
|short_description=p1@ECHDC2
|description=CAGE_peak_1_at_ECHDC2_5end
|association_with_transcript=0bp_to_ENST00000358358,ENST000003715...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55268 | |EntrezGene=55268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23408 | |HGNC=23408 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YB7,F5GWU3 | |UniProt=Q86YB7,F5GWU3 | ||
|association_with_transcript=0bp_to_ENST00000358358,ENST00000371522,ENST00000460612,ENST00000467988,ENST00000474789,ENST00000495920,NM_001198961,NM_001198962,NM_018281_5end | |||
|cluster_id=chr1:53387386..53387453,- | |||
|description=CAGE_peak_1_at_ECHDC2_5end | |||
|id=chr1:53387386..53387453,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-20!115;UBERON:0000466!1.03e-08!126;UBERON:0000949!1.82e-08!45;UBERON:0005177!1.85e-08!107;UBERON:0002417!2.64e-08!61;UBERON:0000916!2.64e-08!61;UBERON:0005172!3.07e-08!55;UBERON:0005173!3.07e-08!55;UBERON:0002530!4.08e-08!59;UBERON:0004119!4.47e-08!169;UBERON:0000925!4.47e-08!169;UBERON:0006595!4.47e-08!169;UBERON:0003103!1.37e-07!69;UBERON:0000481!1.55e-07!347;UBERON:0001007!3.05e-07!155;UBERON:0001555!3.05e-07!155;UBERON:0007026!3.05e-07!155;UBERON:0009569!3.28e-07!113;UBERON:0002368!4.07e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002368;5.07e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.13e-20,114;UBERON:0005177,4.34e-09,101;UBERON:0000949,1.56e-08,45;UBERON:0002417,1.93e-08,60;UBERON:0000916,1.93e-08,60;UBERON:0005172,2.18e-08,54;UBERON:0005173,2.18e-08,54;UBERON:0002530,3.55e-08,59;UBERON:0003103,1.16e-07,68;UBERON:0009569,1.51e-07,112;UBERON:0002368,3.50e-07,35;UBERON:0004119,5.15e-07,160;UBERON:0000925,5.15e-07,160;UBERON:0006595,5.15e-07,160 | |||
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| ||
|short_description=p1@ECHDC2 | |||
}} | }} |
Latest revision as of 13:22, 18 September 2015
Short description: | p1@ECHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ECHDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358358, ENST00000371522, ENST00000460612, ENST00000467988, ENST00000474789, ENST00000495920, NM_001198961, NM_001198962, NM_018281_5end |
EntrezGene: | ECHDC2 |
HGNC: | 23408 |
UniProt: | Q86YB7F5GWU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.13e-20 | 114 |
trunk region element | 4.34e-09 | 101 |
endocrine system | 1.56e-08 | 45 |
abdominal segment of trunk | 1.93e-08 | 60 |
abdomen | 1.93e-08 | 60 |
abdomen element | 2.18e-08 | 54 |
abdominal segment element | 2.18e-08 | 54 |
gland | 3.55e-08 | 59 |
compound organ | 1.16e-07 | 68 |
subdivision of trunk | 1.51e-07 | 112 |
endocrine gland | 3.50e-07 | 35 |
endoderm-derived structure | 5.15e-07 | 160 |
endoderm | 5.15e-07 | 160 |
presumptive endoderm | 5.15e-07 | 160 |