FFCP PHASE1:Hg19::chr6:140299473..140299486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:140299473..140299486,+ | |||
|description=CAGE_peak_at_chr6:140299473..140299486,+ | |description=CAGE_peak_at_chr6:140299473..140299486,+ | ||
|id=chr6:140299473..140299486,+ | |id=chr6:140299473..140299486,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.09e-09!3;CL:0000197!2.02e-08!6;CL:0000098!2.02e-08!6;CL:0002167!2.02e-08!6 | |ontology_enrichment_celltype=CL:0002541!2.09e-09!3;CL:0000197!2.02e-08!6;CL:0000098!2.02e-08!6;CL:0002167!2.02e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.99e-48;6!CL:0000098;1.99e-48;6!CL:0002167;1.99e-48;6!CL:0002541;4.05e-25;3!CL:0000710;7.15e-15;20!CL:0002077;3.38e-12;34!CL:0000075;4.14e-11;27!CL:0002561;2.60e-10;2!CL:0000349;3.33e-09;19!CL:0002577;2.71e-07;3 | |ontology_enrichment_celltype_v019=CL:0000197;1.99e-48;6!CL:0000098;1.99e-48;6!CL:0002167;1.99e-48;6!CL:0002541;4.05e-25;3!CL:0000710;7.15e-15;20!CL:0002077;3.38e-12;34!CL:0000075;4.14e-11;27!CL:0002561;2.60e-10;2!CL:0000349;3.33e-09;19!CL:0002577;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,9.58e-49,6;CL:0000098,9.58e-49,6;CL:0002167,9.58e-49,6;CL:0002541,6.22e-25,3;CL:0000710,5.77e-15,20;CL:0002077,1.80e-13,34;CL:0000075,3.54e-11,27;CL:0002561,2.72e-10,2;CL:0000349,3.43e-09,19;CL:0002577,2.32e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!4.61e-07!2 | |ontology_enrichment_disease=DOID:1909!4.61e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.18e-36;2 | |ontology_enrichment_disease_v019=DOID:1909;1.18e-36;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.42e-36,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!9.79e-14!5;UBERON:0004117!9.79e-14!5;UBERON:0007689!9.79e-14!5;UBERON:0007123!9.79e-14!5;UBERON:0003091!9.79e-14!5;UBERON:0005631!8.53e-12!14;UBERON:0000158!8.53e-12!14;UBERON:0003124!2.53e-10!7;UBERON:0000476!2.09e-09!3;UBERON:0000920!2.09e-09!3 | |ontology_enrichment_uberon=UBERON:0002046!9.79e-14!5;UBERON:0004117!9.79e-14!5;UBERON:0007689!9.79e-14!5;UBERON:0007123!9.79e-14!5;UBERON:0003091!9.79e-14!5;UBERON:0005631!8.53e-12!14;UBERON:0000158!8.53e-12!14;UBERON:0003124!2.53e-10!7;UBERON:0000476!2.09e-09!3;UBERON:0000920!2.09e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.05e-25;3!UBERON:0000920;4.05e-25;3!UBERON:0001003;2.06e-11;15!UBERON:0007376;2.06e-11;15!UBERON:0005933;2.60e-10;2!UBERON:0005942;2.60e-10;2!UBERON:0005932;2.60e-10;2!UBERON:0005631;3.20e-08;10!UBERON:0000158;3.20e-08;10!UBERON:0000478;2.11e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;4.05e-25;3!UBERON:0000920;4.05e-25;3!UBERON:0001003;2.06e-11;15!UBERON:0007376;2.06e-11;15!UBERON:0005933;2.60e-10;2!UBERON:0005942;2.60e-10;2!UBERON:0005932;2.60e-10;2!UBERON:0005631;3.20e-08;10!UBERON:0000158;3.20e-08;10!UBERON:0000478;2.11e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.22e-25,3;UBERON:0003124,8.36e-24,7;UBERON:0005631,2.95e-12,14;UBERON:0000158,2.95e-12,14;UBERON:0001003,2.18e-11,15;UBERON:0007376,2.18e-11,15;UBERON:0007383,2.18e-11,15;UBERON:0005933,2.72e-10,2;UBERON:0005942,2.72e-10,2;UBERON:0005932,2.72e-10,2;UBERON:0000478,2.15e-07,24 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.66376689224646,2.3195768543631,1.89242898040722,2.92853537481783,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,1.66435439510497,0,0.744323423456331,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.455768223388005,0,0,0,2.23300811812344,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,1.51649117541648,1.14186133417987,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0.23806443146374,0,0,0.112131862580613,0.636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0.726713517082227,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.66376689224646,2.3195768543631,1.89242898040722,2.92853537481783,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,1.66435439510497,0,0.744323423456331,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.455768223388005,0,0,0,2.23300811812344,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,1.51649117541648,1.14186133417987,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0.23806443146374,0,0,0.112131862580613,0.636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:140299473..140299486,+ | |short_description=p@chr6:140299473..140299486,+ | ||
}} | }} |
Latest revision as of 20:15, 30 July 2015
Short description: | p@chr6:140299473..140299486, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:140299473..140299486, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 9.58e-49 | 6 |
sensory epithelial cell | 9.58e-49 | 6 |
olfactory epithelial cell | 9.58e-49 | 6 |
chorionic membrane mesenchymal stem cell | 6.22e-25 | 3 |
neurecto-epithelial cell | 5.77e-15 | 20 |
ecto-epithelial cell | 1.80e-13 | 34 |
columnar/cuboidal epithelial cell | 3.54e-11 | 27 |
outer root sheath cell | 2.72e-10 | 2 |
extraembryonic cell | 3.43e-09 | 19 |
placental epithelial cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.22e-25 | 3 |
chorion | 8.36e-24 | 7 |
extraembryonic membrane | 2.95e-12 | 14 |
membranous layer | 2.95e-12 | 14 |
skin epidermis | 2.18e-11 | 15 |
outer epithelium | 2.18e-11 | 15 |
enveloping layer of ectoderm | 2.18e-11 | 15 |
hair root sheath | 2.72e-10 | 2 |
hair outer root sheath | 2.72e-10 | 2 |
bulb of hair follicle | 2.72e-10 | 2 |
extraembryonic structure | 2.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.42e-36 | 2 |