FFCP PHASE1:Hg19::chr1:6105937..6105963,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:6105937..6105963,+
|short_description=p8@KCNAB2
|description=CAGE_peak_8_at_KCNAB2_5end
|association_with_transcript=-17bp_to_ENST00000378083,NM_001199862,...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8514 | |EntrezGene=8514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6229 | |HGNC=6229 | ||
|TSSclassifier=strong | |||
|UniProt=Q13303 | |UniProt=Q13303 | ||
|association_with_transcript=-17bp_to_ENST00000378083,NM_001199862,uc001aly.1,uc009vlw.1_5end | |||
|cluster_id=chr1:6105937..6105963,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_8_at_KCNAB2_5end | |||
|id=chr1:6105937..6105963,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.32e-14!12;CL:0000417!7.32e-14!12;CL:0000668!7.32e-14!12;CL:0000414!7.32e-14!12;CL:0000412!7.32e-14!12;CL:0000182!7.32e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.24e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.12e-12;10!UBERON:0007687;2.12e-12;10!UBERON:0003104;3.14e-09;31 | |||
|ontology_enrichment_disease=DOID:630!4.11e-08!1;DOID:0050177!4.11e-08!1;DOID:0050427!4.11e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!2.04e-12!25;UBERON:0000015!2.04e-12!25;UBERON:0002423!2.04e-12!25;UBERON:0006235!2.04e-12!25;UBERON:0004161!2.04e-12!25;UBERON:0002107!2.47e-12!19;UBERON:0006925!2.47e-12!19;UBERON:0008836!2.47e-12!19;UBERON:0008835!1.40e-10!22;UBERON:0003894!1.40e-10!22;UBERON:0009854!4.27e-10!23;UBERON:0007499!3.03e-09!25;UBERON:0005057!7.21e-09!26;UBERON:0009856!7.21e-09!26;UBERON:0005172!1.32e-08!55;UBERON:0005173!1.32e-08!55;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0002417!1.28e-07!61;UBERON:0000916!1.28e-07!61;UBERON:0002365!2.38e-07!31;UBERON:0002330!2.38e-07!31;UBERON:0003929!6.92e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.84e-14;19!UBERON:0006925;4.84e-14;19!UBERON:0002423;7.54e-11;25!UBERON:0005172;7.58e-11;52!UBERON:0005173;7.58e-11;52!UBERON:0002365;3.71e-09;31!UBERON:0002330;3.71e-09;31!UBERON:0002368;2.31e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.53e-14,19;UBERON:0006925,4.53e-14,19;UBERON:0008836,4.53e-14,19;UBERON:0005172,1.91e-13,54;UBERON:0005173,1.91e-13,54;UBERON:0008835,2.96e-12,22;UBERON:0003894,2.96e-12,22;UBERON:0002417,3.89e-12,60;UBERON:0000916,3.89e-12,60;UBERON:0009854,9.39e-12,23;UBERON:0007499,7.16e-11,25;UBERON:0009497,7.16e-11,25;UBERON:0000015,7.16e-11,25;UBERON:0002423,7.16e-11,25;UBERON:0006235,7.16e-11,25;UBERON:0004161,7.16e-11,25;UBERON:0009856,1.76e-10,26;UBERON:0002365,6.70e-09,31;UBERON:0002330,6.70e-09,31;UBERON:0002368,5.87e-08,35;UBERON:0005177,2.54e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,15.5865099842278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,13.8698044846589,2.41291105420991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.61207457045891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,15.5865099842278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,13.8698044846589,2.41291105420991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.61207457045891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p8@KCNAB2 | |||
}} | }} |
Latest revision as of 18:03, 18 September 2015
Short description: | p8@KCNAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KCNAB2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -17bp_to_ENST00000378083, NM_001199862, uc001aly.1, uc009vlw.1_5end |
EntrezGene: | KCNAB2 |
HGNC: | 6229 |
UniProt: | Q13303 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.13e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.53e-14 | 19 |
digestive gland | 4.53e-14 | 19 |
liver bud | 4.53e-14 | 19 |
abdomen element | 1.91e-13 | 54 |
abdominal segment element | 1.91e-13 | 54 |
hepatic diverticulum | 2.96e-12 | 22 |
liver primordium | 2.96e-12 | 22 |
abdominal segment of trunk | 3.89e-12 | 60 |
abdomen | 3.89e-12 | 60 |
digestive tract diverticulum | 9.39e-12 | 23 |
epithelial sac | 7.16e-11 | 25 |
epithelium of foregut-midgut junction | 7.16e-11 | 25 |
anatomical boundary | 7.16e-11 | 25 |
hepatobiliary system | 7.16e-11 | 25 |
foregut-midgut junction | 7.16e-11 | 25 |
septum transversum | 7.16e-11 | 25 |
sac | 1.76e-10 | 26 |
exocrine gland | 6.70e-09 | 31 |
exocrine system | 6.70e-09 | 31 |
endocrine gland | 5.87e-08 | 35 |
trunk region element | 2.54e-07 | 101 |