FFCP PHASE1:Hg19::chr12:108238355..108238361,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:108238355..108238361,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr12:108238355..108238361,+ | |description=CAGE_peak_at_chr12:108238355..108238361,+ | ||
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|ontology_enrichment_celltype=CL:0002541!1.24e-43!3;CL:0002537!1.19e-12!5;CL:0002588!2.31e-08!2 | |ontology_enrichment_celltype=CL:0002541!1.24e-43!3;CL:0002537!1.19e-12!5;CL:0002588!2.31e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.19e-53;5!CL:0000349;4.52e-32;19!CL:0002541;4.09e-23;3!CL:0000134;3.83e-10;55!CL:0000723;1.63e-07;61!CL:0000048;1.90e-07;58 | |ontology_enrichment_celltype_v019=CL:0002537;2.19e-53;5!CL:0000349;4.52e-32;19!CL:0002541;4.09e-23;3!CL:0000134;3.83e-10;55!CL:0000723;1.63e-07;61!CL:0000048;1.90e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.19e-53,5;CL:0000349,4.52e-32,19;CL:0002541,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.31e-50!7;UBERON:0005631!1.96e-49!14;UBERON:0000158!1.96e-49!14;UBERON:0000476!1.24e-43!3;UBERON:0000920!1.24e-43!3;UBERON:0000478!1.02e-28!24;UBERON:0004923!2.40e-15!57;UBERON:0001987!5.24e-15!4;UBERON:0004340!5.24e-15!4;UBERON:0000305!2.69e-09!7;UBERON:0004871!3.04e-08!8 | |ontology_enrichment_uberon=UBERON:0003124!1.31e-50!7;UBERON:0005631!1.96e-49!14;UBERON:0000158!1.96e-49!14;UBERON:0000476!1.24e-43!3;UBERON:0000920!1.24e-43!3;UBERON:0000478!1.02e-28!24;UBERON:0004923!2.40e-15!57;UBERON:0001987!5.24e-15!4;UBERON:0004340!5.24e-15!4;UBERON:0000305!2.69e-09!7;UBERON:0004871!3.04e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000305;1.49e-38;7!UBERON:0000478;1.16e-25;24!UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000305;1.49e-38;7!UBERON:0000478;1.16e-25;24!UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0000305,1.49e-38,7;UBERON:0004871,6.50e-34,8;UBERON:0000478,1.16e-25,24;UBERON:0000920,4.09e-23,3;UBERON:0003124,9.89e-11,7;UBERON:0004923,4.66e-10,66 | |||
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|short_description=p@chr12:108238355..108238361,+ | |short_description=p@chr12:108238355..108238361,+ | ||
}} | }} |
Latest revision as of 04:33, 24 July 2015
Short description: | p@chr12:108238355..108238361, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:108238355..108238361, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.19e-53 | 5 |
extraembryonic cell | 4.52e-32 | 19 |
chorionic membrane mesenchymal stem cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
amnion | 1.49e-38 | 7 |
somatic layer of lateral plate mesoderm | 6.50e-34 | 8 |
extraembryonic structure | 1.16e-25 | 24 |
egg chorion | 4.09e-23 | 3 |
chorion | 9.89e-11 | 7 |
organ component layer | 4.66e-10 | 66 |