FFCP PHASE1:Hg19::chr3:164169061..164169072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:164169061..164169072,+ | |||
|description=CAGE_peak_at_chr3:164169061..164169072,+ | |description=CAGE_peak_at_chr3:164169061..164169072,+ | ||
|id=chr3:164169061..164169072,+ | |id=chr3:164169061..164169072,+ | ||
|ontology_enrichment_celltype=CL:0002334!7.08e-07!12;CL:0002580!7.97e-07!3 | |ontology_enrichment_celltype=CL:0002334!7.08e-07!12;CL:0002580!7.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.98e-26;3!CL:0002579;3.21e-25;3!CL:0002334;1.59e-24;12 | |ontology_enrichment_celltype_v019=CL:0002580;5.98e-26;3!CL:0002579;3.21e-25;3!CL:0002334;1.59e-24;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,4.10e-26,3;CL:0002579,1.46e-25,3;CL:0002334,8.94e-25,12;CL:0000057,1.48e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.40e-08;5 | |ontology_enrichment_development_v019=UBERON:0007123;6.40e-08;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3350;2.04e-17;2!DOID:3369;4.65e-10;1!DOID:6193;1.42e-09;1!DOID:3571;1.42e-09;1 | |ontology_enrichment_disease_v019=DOID:3350;2.04e-17;2!DOID:3369;4.65e-10;1!DOID:6193;1.42e-09;1!DOID:3571;1.42e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3350,2.41e-17,2;DOID:3369,4.46e-10,1;DOID:6193,1.25e-09,1;DOID:3571,1.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.09e-11!6;UBERON:0002358!2.09e-11!6;UBERON:0003684!2.09e-11!6;UBERON:0001178!2.09e-11!6;UBERON:0002046!4.52e-09!5;UBERON:0004117!4.52e-09!5;UBERON:0007689!4.52e-09!5;UBERON:0007123!4.52e-09!5;UBERON:0003091!4.52e-09!5;UBERON:0004457!9.63e-09!12;UBERON:0000042!9.63e-09!12 | |ontology_enrichment_uberon=UBERON:0003688!2.09e-11!6;UBERON:0002358!2.09e-11!6;UBERON:0003684!2.09e-11!6;UBERON:0001178!2.09e-11!6;UBERON:0002046!4.52e-09!5;UBERON:0004117!4.52e-09!5;UBERON:0007689!4.52e-09!5;UBERON:0007123!4.52e-09!5;UBERON:0003091!4.52e-09!5;UBERON:0004457!9.63e-09!12;UBERON:0000042!9.63e-09!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.98e-22;6!UBERON:0002358;3.98e-22;6!UBERON:0003684;3.98e-22;6!UBERON:0001178;3.98e-22;6!UBERON:0004457;7.67e-15;9!UBERON:0000042;7.67e-15;9!UBERON:0000310;1.15e-13;10!UBERON:0001443;1.93e-12;11!UBERON:0007195;6.04e-10;1!UBERON:0002135;1.42e-09;1!UBERON:0002046;6.40e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.98e-22;6!UBERON:0002358;3.98e-22;6!UBERON:0003684;3.98e-22;6!UBERON:0001178;3.98e-22;6!UBERON:0004457;7.67e-15;9!UBERON:0000042;7.67e-15;9!UBERON:0000310;1.15e-13;10!UBERON:0001443;1.93e-12;11!UBERON:0007195;6.04e-10;1!UBERON:0002135;1.42e-09;1!UBERON:0002046;6.40e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.58e-22,6;UBERON:0002358,3.58e-22,6;UBERON:0003684,3.58e-22,6;UBERON:0001178,3.58e-22,6;UBERON:0000310,8.87e-14,10;UBERON:0001443,1.52e-12,11;UBERON:0004457,3.31e-11,12;UBERON:0000042,3.31e-11,12;UBERON:0007195,6.88e-10,1;UBERON:0002135,1.76e-09,1;UBERON:0002046,6.51e-08,5;UBERON:0004117,6.51e-08,5;UBERON:0007689,6.51e-08,5;UBERON:0007123,6.51e-08,5;UBERON:0003091,6.51e-08,5 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0.886413581652058,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0.847727604638247,0,0.206105058476878,0,0.18611685633159,0,0.68205903612839,0.504867548488229,1.01254888506529,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,2.455391572609,2.52594084989766,1.40953064181271,1.02341449813341,1.44768529029247,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.461701551022782,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0.223171457441873,0,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0.686520205190771,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0.673498977531838,0,0,4.93215660162329,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,2.34454203369928,0,0.49131575253029,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,0,0,0.857440047187092,0,0,0,0,0.39246546425257,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.1903221573187,0,0,0.448527450322454,5.02812550397503,3.43599221228973,0,0,0.0673520530145875,0.143444410785353,0,0,0.320182037633146,0,0,0,0,0,0,0,0 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|phase1_expression=1.2717486548939,0.856402095563933,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0.886413581652058,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0.847727604638247,0,0.206105058476878,0,0.18611685633159,0,0.68205903612839,0.504867548488229,1.01254888506529,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,2.455391572609,2.52594084989766,1.40953064181271,1.02341449813341,1.44768529029247,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.461701551022782,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0.223171457441873,0,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0.686520205190771,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0.673498977531838,0,0,4.93215660162329,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,2.34454203369928,0,0.49131575253029,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.682986574053893,0,0,0.857440047187092,0,0,0,0,0.39246546425257,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.1903221573187,0,0,0.448527450322454,5.02812550397503,3.43599221228973,0,0,0.0673520530145875,0.143444410785353,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:164169061..164169072,+ | |short_description=p@chr3:164169061..164169072,+ | ||
}} | }} |
Latest revision as of 17:53, 29 July 2015
Short description: | p@chr3:164169061..164169072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:164169061..164169072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 4.10e-26 | 3 |
omentum preadipocyte | 1.46e-25 | 3 |
preadipocyte | 8.94e-25 | 12 |
fibroblast | 1.48e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.58e-22 | 6 |
peritoneum | 3.58e-22 | 6 |
abdominal cavity | 3.58e-22 | 6 |
visceral peritoneum | 3.58e-22 | 6 |
breast | 8.87e-14 | 10 |
chest | 1.52e-12 | 11 |
cavity lining | 3.31e-11 | 12 |
serous membrane | 3.31e-11 | 12 |
stroma of bone marrow | 6.88e-10 | 1 |
mitral valve | 1.76e-09 | 1 |
thyroid gland | 6.51e-08 | 5 |
pharyngeal pouch | 6.51e-08 | 5 |
thyroid diverticulum | 6.51e-08 | 5 |
pharyngeal pouch 2 | 6.51e-08 | 5 |
thyroid primordium | 6.51e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 2.41e-17 | 2 |
peripheral primitive neuroectodermal tumor | 4.46e-10 | 1 |
epithelioid sarcoma | 1.25e-09 | 1 |
liver cancer | 1.91e-09 | 1 |