FFCP PHASE1:Hg19::chr1:90286755..90286762,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:90286755..90286762,+
|short_description=p19@LRRC8D
|description=CAGE_peak_19_at_LRRC8D_5end
|association_with_transcript=164bp_to_ENST00000337338_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55144 | |EntrezGene=55144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16992 | |HGNC=16992 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L1W4 | |UniProt=Q7L1W4 | ||
|association_with_transcript=164bp_to_ENST00000337338_5end | |||
|cluster_id=chr1:90286755..90286762,+ | |||
|description=CAGE_peak_19_at_LRRC8D_5end | |||
|id=chr1:90286755..90286762,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002231;6.34e-08;3!CL:0000307;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.26e-08,3;CL:0000069,7.26e-08,3;CL:0000307,7.26e-08,3;CL:0000377,7.26e-08,3;CL:0002231,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.22e-21;1!CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.36e-08!106;DOID:0050687!2.12e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002368!4.04e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;4.22e-21;1!UBERON:0001567;4.22e-21;1!UBERON:0001905;3.02e-11;2!UBERON:0001829;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0004089;3.02e-11;2!UBERON:0001899;3.02e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,5.16e-21,1;UBERON:0001567,5.16e-21,1;UBERON:0008801,5.16e-21,1;UBERON:0001829,3.35e-11,2;UBERON:0004089,3.35e-11,2;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2 | |||
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| ||
|short_description=p19@LRRC8D | |||
}} | }} |
Latest revision as of 18:10, 19 September 2015
Short description: | p19@LRRC8D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LRRC8D_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000337338_5end |
EntrezGene: | LRRC8D |
HGNC: | 16992 |
UniProt: | Q7L1W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.26e-08 | 3 |
branched duct epithelial cell | 7.26e-08 | 3 |
tracheal epithelial cell | 7.26e-08 | 3 |
tracheoblast | 7.26e-08 | 3 |
epithelial cell of prostate | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 5.16e-21 | 1 |
cheek | 5.16e-21 | 1 |
parotid gland primordium | 5.16e-21 | 1 |
major salivary gland | 3.35e-11 | 2 |
midface | 3.35e-11 | 2 |
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |