FFCP PHASE1:Hg19::chr11:5247857..5247902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3043 | |EntrezGene=3043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4827 | |HGNC=4827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=150bp_to_ENST00000475226_5end | |association_with_transcript=150bp_to_ENST00000475226_5end | ||
|cluster_id=chr11:5247857..5247902,- | |||
|coexpression_cluster_id=C478 | |coexpression_cluster_id=C478 | ||
|description=CAGE_peak_2_at_HBB_5end | |description=CAGE_peak_2_at_HBB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!4.73e-11!42;CL:0000860!5.83e-10!45 | |ontology_enrichment_celltype=CL:0002057!4.73e-11!42;CL:0000860!5.83e-10!45 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.67e-11;2!CL:0000558;3.67e-11;2 | |ontology_enrichment_celltype_v019=CL:0000764;3.67e-11;2!CL:0000558;3.67e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.68e-11,2;CL:0000765,3.68e-11,2;CL:0000050,3.68e-11,2;CL:0000038,3.68e-11,2;CL:0000558,3.68e-11,2;CL:0000547,3.68e-11,2;CL:0000549,3.68e-11,2;CL:0000550,3.68e-11,2;CL:0000552,3.68e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.45e-10;2 | |ontology_enrichment_development_v019=UBERON:0007297;3.45e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.56e-38!115;UBERON:0000178!2.26e-17!15;UBERON:0000179!2.26e-17!15;UBERON:0000463!2.26e-17!15;UBERON:0002390!1.79e-11!102;UBERON:0003061!1.79e-11!102;UBERON:0002193!4.15e-11!112;UBERON:0003081!6.06e-07!216 | |ontology_enrichment_uberon=UBERON:0007023!7.56e-38!115;UBERON:0000178!2.26e-17!15;UBERON:0000179!2.26e-17!15;UBERON:0000463!2.26e-17!15;UBERON:0002390!1.79e-11!102;UBERON:0003061!1.79e-11!102;UBERON:0002193!4.15e-11!112;UBERON:0003081!6.06e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.82e-32;15!UBERON:0000179;2.82e-32;15!UBERON:0000463;2.82e-32;15!UBERON:0002390;3.99e-13;32!UBERON:0002133;1.94e-10;2!UBERON:0002193;1.82e-07;42!UBERON:0004151;2.70e-07;3!UBERON:0003978;3.11e-07;3!UBERON:0000946;3.11e-07;3!UBERON:0006947;4.54e-07;3!UBERON:0004054;4.54e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.82e-32;15!UBERON:0000179;2.82e-32;15!UBERON:0000463;2.82e-32;15!UBERON:0002390;3.99e-13;32!UBERON:0002133;1.94e-10;2!UBERON:0002193;1.82e-07;42!UBERON:0004151;2.70e-07;3!UBERON:0003978;3.11e-07;3!UBERON:0000946;3.11e-07;3!UBERON:0006947;4.54e-07;3!UBERON:0004054;4.54e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.08e-32,15;UBERON:0000179,3.08e-32,15;UBERON:0000463,3.08e-32,15;UBERON:0007023,1.73e-17,114;UBERON:0002133,1.77e-10,2;UBERON:0002390,6.84e-08,98;UBERON:0003061,6.84e-08,98;UBERON:0004151,2.66e-07,3;UBERON:0003978,2.92e-07,3;UBERON:0009751,2.92e-07,3;UBERON:0000946,2.92e-07,3;UBERON:0002523,2.92e-07,3;UBERON:0005983,2.92e-07,3;UBERON:0002165,2.92e-07,3;UBERON:0002062,2.92e-07,3;UBERON:0007280,2.92e-07,3;UBERON:0006947,6.39e-07,3;UBERON:0004054,6.39e-07,3;UBERON:0002193,6.95e-07,108 | |||
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| ||
|short_description=p2@HBB | |short_description=p2@HBB | ||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p2@HBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HBB_5end |
Coexpression cluster: | C478_blood_Whole_Reticulocytes_liver_skeletal_lung_Neutrophils |
Association with transcript: | 150bp_to_ENST00000475226_5end |
EntrezGene: | HBB |
HGNC: | 4827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.68e-11 | 2 |
erythroblast | 3.68e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 3.68e-11 | 2 |
erythroid progenitor cell | 3.68e-11 | 2 |
reticulocyte | 3.68e-11 | 2 |
proerythroblast | 3.68e-11 | 2 |
basophilic erythroblast | 3.68e-11 | 2 |
polychromatophilic erythroblast | 3.68e-11 | 2 |
orthochromatic erythroblast | 3.68e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.08e-32 | 15 |
haemolymphatic fluid | 3.08e-32 | 15 |
organism substance | 3.08e-32 | 15 |
adult organism | 1.73e-17 | 114 |
atrioventricular valve | 1.77e-10 | 2 |
hematopoietic system | 6.84e-08 | 98 |
blood island | 6.84e-08 | 98 |
cardiac chamber | 2.66e-07 | 3 |
valve | 2.92e-07 | 3 |
cardiac mesenchyme | 2.92e-07 | 3 |
cardial valve | 2.92e-07 | 3 |
tunica intima | 2.92e-07 | 3 |
heart layer | 2.92e-07 | 3 |
endocardium | 2.92e-07 | 3 |
endocardial cushion | 2.92e-07 | 3 |
presumptive endocardium | 2.92e-07 | 3 |
male genital duct | 6.39e-07 | 3 |
internal male genitalia | 6.39e-07 | 3 |
hemolymphoid system | 6.95e-07 | 108 |