FFCP PHASE1:Hg19::chr8:54934917..54934938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6917 | |EntrezGene=6917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11612 | |HGNC=11612 | ||
|TSSclassifier=strong | |||
|UniProt=E5RK46 | |UniProt=E5RK46 | ||
|association_with_transcript=-31bp_to_ENST00000519704_5end | |association_with_transcript=-31bp_to_ENST00000519704_5end | ||
|cluster_id=chr8:54934917..54934938,- | |||
|coexpression_cluster_id=C4761 | |coexpression_cluster_id=C4761 | ||
|description=CAGE_peak_3_at_TCEA1_5end | |description=CAGE_peak_3_at_TCEA1_5end | ||
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|ontology_enrichment_celltype=CL:0000548!5.46e-31!679;CL:0000004!5.46e-31!679;CL:0000255!5.46e-31!679;CL:0000012!2.00e-30!682;CL:0000003!6.42e-18!722;CL:0000063!4.54e-17!578;CL:0000066!9.65e-14!254;CL:0000144!1.56e-13!625;CL:0000055!3.02e-10!180;CL:0002321!2.75e-09!248;CL:0000220!1.11e-08!246;CL:0002371!1.91e-08!591;CL:0000057!1.72e-07!75;CL:0000223!3.29e-07!59 | |ontology_enrichment_celltype=CL:0000548!5.46e-31!679;CL:0000004!5.46e-31!679;CL:0000255!5.46e-31!679;CL:0000012!2.00e-30!682;CL:0000003!6.42e-18!722;CL:0000063!4.54e-17!578;CL:0000066!9.65e-14!254;CL:0000144!1.56e-13!625;CL:0000055!3.02e-10!180;CL:0002321!2.75e-09!248;CL:0000220!1.11e-08!246;CL:0002371!1.91e-08!591;CL:0000057!1.72e-07!75;CL:0000223!3.29e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.01e-12,253;CL:0002321,4.12e-09,250;CL:0000223,9.12e-08,58;CL:0000057,1.49e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!6.00e-38!235;DOID:14566!7.14e-38!239;DOID:0050687!2.34e-24!143;DOID:305!1.50e-18!106;DOID:0050686!3.60e-17!137;DOID:7!2.19e-07!39 | |ontology_enrichment_disease=DOID:162!6.00e-38!235;DOID:14566!7.14e-38!239;DOID:0050687!2.34e-24!143;DOID:305!1.50e-18!106;DOID:0050686!3.60e-17!137;DOID:7!2.19e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,8.85e-39,235;DOID:14566,1.21e-38,239;DOID:0050687,6.01e-25,143;DOID:305,8.40e-19,106;DOID:0050686,2.00e-17,137;DOID:7,1.19e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004458!3.19e-07!49;UBERON:0002323!7.18e-07!46 | |ontology_enrichment_uberon=UBERON:0004458!3.19e-07!49;UBERON:0002323!7.18e-07!46 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004458,1.08e-07,49;UBERON:0002323,2.49e-07,46 | |||
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| ||
|short_description=p3@TCEA1 | |short_description=p3@TCEA1 | ||
}} | }} |
Latest revision as of 12:21, 18 September 2015
Short description: | p3@TCEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TCEA1_5end |
Coexpression cluster: | C4761_testicular_Wilms_mucinous_lung_large_H9_mesothelioma |
Association with transcript: | -31bp_to_ENST00000519704_5end |
EntrezGene: | TCEA1 |
HGNC: | 11612 |
UniProt: | E5RK46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.01e-12 | 253 |
embryonic cell | 4.12e-09 | 250 |
endodermal cell | 9.12e-08 | 58 |
fibroblast | 1.49e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
body cavity or lining | 1.08e-07 | 49 |
body cavity | 2.49e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.85e-39 | 235 |
disease of cellular proliferation | 1.21e-38 | 239 |
cell type cancer | 6.01e-25 | 143 |
carcinoma | 8.40e-19 | 106 |
organ system cancer | 2.00e-17 | 137 |
disease of anatomical entity | 1.19e-07 | 39 |