FFCP PHASE1:Hg19::chr20:48818205..48818210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48818205..48818210,+ | |||
|coexpression_cluster_id=C1235 | |coexpression_cluster_id=C1235 | ||
|description=CAGE_peak_at_chr20:48818205..48818210,+ | |description=CAGE_peak_at_chr20:48818205..48818210,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.73e-11;3!CL:0000333;6.04e-07;5 | |ontology_enrichment_celltype_v019=CL:0000775;6.73e-11;3!CL:0000333;6.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.73e-11,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!7.22e-19!143;DOID:14566!4.69e-16!239;DOID:1749!2.67e-15!14;DOID:162!3.19e-15!235;DOID:305!4.97e-12!106 | |ontology_enrichment_disease=DOID:0050687!7.22e-19!143;DOID:14566!4.69e-16!239;DOID:1749!2.67e-15!14;DOID:162!3.19e-15!235;DOID:305!4.97e-12!106 | ||
|ontology_enrichment_disease_v019=DOID:171;2.37e-12;10 | |ontology_enrichment_disease_v019=DOID:171;2.37e-12;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.51e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.42e-08!4;UBERON:0004785!1.42e-08!4;UBERON:0000344!1.98e-07!12;UBERON:0000974!6.39e-07!10;UBERON:0003729!7.73e-07!5 | |ontology_enrichment_uberon=UBERON:0003343!1.42e-08!4;UBERON:0004785!1.42e-08!4;UBERON:0000344!1.98e-07!12;UBERON:0000974!6.39e-07!10;UBERON:0003729!7.73e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-08;15!UBERON:0000179;1.65e-08;15!UBERON:0000463;1.65e-08;15!UBERON:0002346;1.82e-08;4!UBERON:0000923;1.82e-08;4!UBERON:0010316;1.82e-08;4!UBERON:0005291;1.82e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5!UBERON:0000013;6.04e-07;5!UBERON:0002410;6.04e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-08;15!UBERON:0000179;1.65e-08;15!UBERON:0000463;1.65e-08;15!UBERON:0002346;1.82e-08;4!UBERON:0000923;1.82e-08;4!UBERON:0010316;1.82e-08;4!UBERON:0005291;1.82e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5!UBERON:0000013;6.04e-07;5!UBERON:0002410;6.04e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-08,15;UBERON:0000179,1.71e-08,15;UBERON:0000463,1.71e-08,15;UBERON:0000013,6.39e-07,5;UBERON:0002410,6.39e-07,5 | |||
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| ||
|short_description=p@chr20:48818205..48818210,+ | |short_description=p@chr20:48818205..48818210,+ | ||
}} | }} |
Latest revision as of 15:10, 28 July 2015
Short description: | p@chr20:48818205..48818210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48818205..48818210, + |
Coexpression cluster: | C1235_neuroectodermal_neuroblastoma_Neutrophils_peripheral_Eosinophils_acute_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.71e-08 | 15 |
haemolymphatic fluid | 1.71e-08 | 15 |
organism substance | 1.71e-08 | 15 |
sympathetic nervous system | 6.39e-07 | 5 |
autonomic nervous system | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.51e-12 | 10 |