FFCP PHASE1:Hg19::chr20:2637264..2637276,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:2637264..2637276,+
|short_description=p1@SNORD56
|description=CAGE_peak_1_at_SNORD56_5end
|association_with_transcript=0bp_to_ENST00000384067,ENST00000413...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26793 | |EntrezGene=26793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10206 | |HGNC=10206 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000384067,ENST00000413522,NR_002739,uc010gar.2_5end | |||
|cluster_id=chr20:2637264..2637276,+ | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_1_at_SNORD56_5end | |||
|id=chr20:2637264..2637276,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;4.76e-13;1!UBERON:0010122;3.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.80e-08!57;UBERON:0005068!5.80e-08!57;UBERON:0006241!5.80e-08!57;UBERON:0007135!5.80e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;4.76e-13;1!UBERON:0008811;4.76e-13;1!UBERON:0001873;3.69e-07;2!UBERON:0002702;3.69e-07;2!UBERON:0002456;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.95e-13,1;UBERON:0008811,2.95e-13,1;UBERON:0006258,2.95e-13,1;UBERON:0005876,2.95e-13,1;UBERON:0004874,2.95e-13,1;UBERON:0002702,2.43e-07,2;UBERON:0001873,2.58e-07,2;UBERON:0010122,2.58e-07,2;UBERON:0002456,4.98e-07,2 | |||
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| ||
|short_description=p1@SNORD56 | |||
}} | }} |
Latest revision as of 23:32, 24 September 2015
Short description: | p1@SNORD56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD56_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000384067, ENST00000413522, NR_002739, uc010gar.2_5end |
EntrezGene: | SNORD56 |
HGNC: | 10206 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 2.95e-13 | 1 |
intromittent organ | 2.95e-13 | 1 |
lateral plate mesenchyme | 2.95e-13 | 1 |
undifferentiated genital tubercle | 2.95e-13 | 1 |
somatopleure | 2.95e-13 | 1 |
middle frontal gyrus | 2.43e-07 | 2 |
caudate nucleus | 2.58e-07 | 2 |
future caudate nucleus | 2.58e-07 | 2 |
internal thoracic artery | 4.98e-07 | 2 |