FFCP PHASE1:Hg19::chr2:11864458..11864481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23175 | |EntrezGene=23175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13345 | |HGNC=13345 | ||
|TSSclassifier=strong | |||
|UniProt=A8MU38,E7ESE7,D6W506 | |UniProt=A8MU38,E7ESE7,D6W506 | ||
|association_with_transcript=0bp_to_ENST00000396098,ENST00000396099,ENST00000425416,ENST00000464517,ENST00000480315,ENST00000495907,uc010yjn.1_5end | |association_with_transcript=0bp_to_ENST00000396098,ENST00000396099,ENST00000425416,ENST00000464517,ENST00000480315,ENST00000495907,uc010yjn.1_5end | ||
|cluster_id=chr2:11864458..11864481,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_LPIN1_5end | |description=CAGE_peak_6_at_LPIN1_5end | ||
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|ontology_enrichment_celltype=CL:0000342!3.30e-40!1;CL:0002565!3.30e-40!1 | |ontology_enrichment_celltype=CL:0000342!3.30e-40!1;CL:0002565!3.30e-40!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.21e-40!1;UBERON:0002506!3.30e-40!1;UBERON:0001769!3.30e-40!1;UBERON:0003135!4.29e-33!11;UBERON:0000473!6.64e-21!8;UBERON:0003101!4.85e-17!22;UBERON:0000079!4.85e-17!22;UBERON:0006947!1.83e-14!3;UBERON:0004054!1.83e-14!3;UBERON:0005904!3.42e-11!4;UBERON:0000488!3.79e-11!4;UBERON:0000991!1.27e-08!21;UBERON:0009196!1.27e-08!21;UBERON:0009117!1.27e-08!21;UBERON:0005564!1.27e-08!21;UBERON:0004176!2.82e-08!22;UBERON:0003133!2.96e-08!48;UBERON:0002203!7.25e-08!6;UBERON:0001768!7.25e-08!6;UBERON:0005156!7.53e-07!59;UBERON:0000990!7.53e-07!59 | |ontology_enrichment_uberon=UBERON:0001301!2.21e-40!1;UBERON:0002506!3.30e-40!1;UBERON:0001769!3.30e-40!1;UBERON:0003135!4.29e-33!11;UBERON:0000473!6.64e-21!8;UBERON:0003101!4.85e-17!22;UBERON:0000079!4.85e-17!22;UBERON:0006947!1.83e-14!3;UBERON:0004054!1.83e-14!3;UBERON:0005904!3.42e-11!4;UBERON:0000488!3.79e-11!4;UBERON:0000991!1.27e-08!21;UBERON:0009196!1.27e-08!21;UBERON:0009117!1.27e-08!21;UBERON:0005564!1.27e-08!21;UBERON:0004176!2.82e-08!22;UBERON:0003133!2.96e-08!48;UBERON:0002203!7.25e-08!6;UBERON:0001768!7.25e-08!6;UBERON:0005156!7.53e-07!59;UBERON:0000990!7.53e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p6@LPIN1 | |short_description=p6@LPIN1 | ||
}} | }} |
Latest revision as of 15:44, 16 September 2015
Short description: | p6@LPIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LPIN1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000396098, ENST00000396099, ENST00000425416, ENST00000464517, ENST00000480315, ENST00000495907, uc010yjn.1_5end |
EntrezGene: | LPIN1 |
HGNC: | 13345 |
UniProt: | A8MU38E7ESE7D6W506 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |