FFCP PHASE1:Hg19::chr10:10837014..10837021,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18383 | |HGNC=18383 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-71bp_to_ENST00000434919_5end | |association_with_transcript=-71bp_to_ENST00000434919_5end | ||
|cluster_id=chr10:10837014..10837021,- | |||
|description=CAGE_peak_9_at_SFTA1P_5end | |description=CAGE_peak_9_at_SFTA1P_5end | ||
|id=chr10:10837014..10837021,- | |id=chr10:10837014..10837021,- | ||
|ontology_enrichment_celltype=CL:0000077!4.95e-08!19 | |ontology_enrichment_celltype=CL:0000077!4.95e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.67e-23;1!CL:0002586;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0000149;8.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0000222;3.67e-23;1!CL:0002586;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0000149;8.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.04e-08,3;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3;CL:0000149,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2!CL:0000377;1.26e-08;3 | |ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2!CL:0000377;1.26e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;1.19e-23;1!DOID:4556;9.66e-09;3!DOID:1749;2.90e-07;14 | |ontology_enrichment_disease_v019=DOID:3112;1.19e-23;1!DOID:4556;9.66e-09;3!DOID:1749;2.90e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,1.34e-23,1;DOID:4556,9.66e-09,3;DOID:1749,2.95e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002046!7.48e-09!5;UBERON:0004117!7.48e-09!5;UBERON:0007689!7.48e-09!5;UBERON:0007123!7.48e-09!5;UBERON:0003091!7.48e-09!5 | |ontology_enrichment_uberon=UBERON:0002046!7.48e-09!5;UBERON:0004117!7.48e-09!5;UBERON:0007689!7.48e-09!5;UBERON:0007123!7.48e-09!5;UBERON:0003091!7.48e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.26e-08;3!UBERON:0001781;1.26e-08;3!UBERON:0001782;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0003343;8.85e-07;4!UBERON:0004785;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001723;1.26e-08;3!UBERON:0001781;1.26e-08;3!UBERON:0001782;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0003343;8.85e-07;4!UBERON:0004785;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.04e-08,3;UBERON:0005424,1.04e-08,3;UBERON:0001723,1.30e-08,3;UBERON:0001033,1.30e-08,3;UBERON:0010056,1.30e-08,3;UBERON:0000065,6.83e-07,54;UBERON:0001781,7.70e-07,4;UBERON:0003343,9.11e-07,4;UBERON:0004785,9.11e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,0,1.03041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,0.78602152549833,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0.428883182749851,3.65392008751296,0,0,0.489473409012935,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,1.15525666150338,0,0,0,0,0,0,0,3.60298218522213,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.672791175483681,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,0,1.03041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,0.78602152549833,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0.428883182749851,3.65392008751296,0,0,0.489473409012935,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,1.15525666150338,0,0,0,0,0,0,0,3.60298218522213,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.672791175483681,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@SFTA1P | |short_description=p9@SFTA1P | ||
}} | }} |
Latest revision as of 06:28, 16 September 2015
Short description: | p9@SFTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SFTA1P_5end |
Coexpression cluster: | NA |
Association with transcript: | -71bp_to_ENST00000434919_5end |
EntrezGene: | NA |
HGNC: | 18383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.04e-08 | 3 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
visual pigment cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.04e-08 | 3 |
presumptive retinal pigmented epithelium | 1.04e-08 | 3 |
tongue | 1.30e-08 | 3 |
gustatory system | 1.30e-08 | 3 |
future tongue | 1.30e-08 | 3 |
respiratory tract | 6.83e-07 | 54 |
layer of retina | 7.70e-07 | 4 |
mucosa of oral region | 9.11e-07 | 4 |
respiratory system mucosa | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.34e-23 | 1 |
lung large cell carcinoma | 9.66e-09 | 3 |
squamous cell carcinoma | 2.95e-07 | 14 |