FFCP PHASE1:Hg19::chr15:96607579..96607599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000558860_5end | |association_with_transcript=55bp_to_ENST00000558860_5end | ||
|cluster_id=chr15:96607579..96607599,- | |||
|coexpression_cluster_id=C224 | |coexpression_cluster_id=C224 | ||
|description=CAGE_peak_1_at_ENST00000558860_5end | |description=CAGE_peak_1_at_ENST00000558860_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.74e-11!3;CL:0000313!3.31e-09!1;CL:0002563!5.12e-09!4 | |ontology_enrichment_celltype=CL:0002541!1.74e-11!3;CL:0000313!3.31e-09!1;CL:0002563!5.12e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;8.36e-34;4!CL:0002253;9.07e-18;2!CL:0000047;1.27e-17;2!CL:0002231;2.89e-12;3!CL:0002076;3.30e-08;42!CL:0002251;1.33e-07;20 | |ontology_enrichment_celltype_v019=CL:0002563;8.36e-34;4!CL:0002253;9.07e-18;2!CL:0000047;1.27e-17;2!CL:0002231;2.89e-12;3!CL:0002076;3.30e-08;42!CL:0002251;1.33e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.36e-34,4;CL:0002253,9.07e-18,2;CL:0002231,2.89e-12,3;CL:0002076,8.32e-08,42;CL:0002251,1.33e-07,20 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!3.31e-09!1 | |ontology_enrichment_disease=DOID:2152!3.31e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;5.48e-18;2 | |ontology_enrichment_disease_v019=DOID:4468;5.48e-18;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,5.48e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.74e-11!3;UBERON:0000920!1.74e-11!3;UBERON:0003124!1.53e-10!7;UBERON:0004911!3.31e-09!1;UBERON:0001242!5.12e-09!4;UBERON:0001262!5.12e-09!4;UBERON:0004786!5.12e-09!4;UBERON:0004808!5.12e-09!4;UBERON:0001277!5.12e-09!4;UBERON:0003350!2.24e-07!5 | |ontology_enrichment_uberon=UBERON:0000476!1.74e-11!3;UBERON:0000920!1.74e-11!3;UBERON:0003124!1.53e-10!7;UBERON:0004911!3.31e-09!1;UBERON:0001242!5.12e-09!4;UBERON:0001262!5.12e-09!4;UBERON:0004786!5.12e-09!4;UBERON:0004808!5.12e-09!4;UBERON:0001277!5.12e-09!4;UBERON:0003350!2.24e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.36e-34;4!UBERON:0001262;8.36e-34;4!UBERON:0004786;8.36e-34;4!UBERON:0004808;8.36e-34;4!UBERON:0001277;8.36e-34;4!UBERON:0000485;7.84e-20;7!UBERON:0003929;7.84e-20;7!UBERON:0003350;1.71e-17;8!UBERON:0001052;1.44e-09;4!UBERON:0000160;2.42e-08;17!UBERON:0004907;6.55e-08;5!UBERON:0000344;1.33e-07;20!UBERON:0005409;9.95e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001242;8.36e-34;4!UBERON:0001262;8.36e-34;4!UBERON:0004786;8.36e-34;4!UBERON:0004808;8.36e-34;4!UBERON:0001277;8.36e-34;4!UBERON:0000485;7.84e-20;7!UBERON:0003929;7.84e-20;7!UBERON:0003350;1.71e-17;8!UBERON:0001052;1.44e-09;4!UBERON:0000160;2.42e-08;17!UBERON:0004907;6.55e-08;5!UBERON:0000344;1.33e-07;20!UBERON:0005409;9.95e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.36e-34,4;UBERON:0001262,8.36e-34,4;UBERON:0004786,8.36e-34,4;UBERON:0004808,8.36e-34,4;UBERON:0001277,8.36e-34,4;UBERON:0003350,1.71e-17,8;UBERON:0000485,1.13e-15,9;UBERON:0001052,1.44e-09,4;UBERON:0000160,2.42e-08,17;UBERON:0001046,6.36e-08,19;UBERON:0004907,6.55e-08,5;UBERON:0000344,1.33e-07,20 | |||
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|short_description=p1@ENST00000558860 | |short_description=p1@ENST00000558860 | ||
}} | }} |
Latest revision as of 05:52, 25 July 2015
Short description: | p1@ENST00000558860 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558860_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | 55bp_to_ENST00000558860_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.36e-34 | 4 |
epithelial cell of large intestine | 9.07e-18 | 2 |
epithelial cell of prostate | 2.89e-12 | 3 |
endo-epithelial cell | 8.32e-08 | 42 |
epithelial cell of alimentary canal | 1.33e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.36e-34 | 4 |
wall of intestine | 8.36e-34 | 4 |
gastrointestinal system mucosa | 8.36e-34 | 4 |
gastrointestinal system epithelium | 8.36e-34 | 4 |
intestinal epithelium | 8.36e-34 | 4 |
epithelium of mucosa | 1.71e-17 | 8 |
simple columnar epithelium | 1.13e-15 | 9 |
rectum | 1.44e-09 | 4 |
intestine | 2.42e-08 | 17 |
hindgut | 6.36e-08 | 19 |
lower digestive tract | 6.55e-08 | 5 |
mucosa | 1.33e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.48e-18 | 2 |