FFCP PHASE1:Hg19::chr20:36846339..36846351,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:36846339..36846351,+
|short_description=p@chr20:36846339..36846351,+
|description=CAGE_peak_at_chr20:36846339..36846351,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36846339..36846351,+ | |||
|description=CAGE_peak_at_chr20:36846339..36846351,+ | |||
|id=chr20:36846339..36846351,+ | |||
|ontology_enrichment_celltype=CL:0002621!7.36e-08!3;CL:0000548!1.48e-07!679;CL:0000004!1.48e-07!679;CL:0000255!1.48e-07!679;CL:0000012!1.99e-07!682;CL:0000066!6.35e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.93e-23;1!CL:0002372;2.93e-23;1!CL:0002097;2.45e-12;2!CL:0002593;2.45e-12;2!CL:0002535;2.45e-12;2!CL:0000174;1.17e-08;3!CL:0000056;8.37e-07;4!CL:0000737;8.37e-07;4!CL:1000306;8.37e-07;4!CL:0002547;8.37e-07;4!CL:0002327;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.10e-23,1;CL:0002372,2.10e-23,1;CL:0002535,1.65e-12,2;CL:0002097,2.32e-12,2;CL:0002593,3.62e-12,2;CL:0000174,1.12e-08,3;CL:0000737,7.70e-07,4;CL:0000515,7.70e-07,4;CL:0002327,9.11e-07,4;CL:1000306,9.63e-07,4;CL:0002547,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.37e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.64e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001949!7.36e-08!3;UBERON:0001828!2.60e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.45e-12;2!UBERON:0004801;2.45e-12;2!UBERON:0002456;2.45e-12;2!UBERON:0002369;1.17e-08;3!UBERON:0001235;1.17e-08;3!UBERON:0006858;1.17e-08;3!UBERON:0001911;8.37e-07;4!UBERON:0004797;8.37e-07;4!UBERON:0000415;8.37e-07;4!UBERON:0007240;8.37e-07;4!UBERON:0005742;8.37e-07;4!UBERON:0005734;8.37e-07;4!UBERON:0004664;8.37e-07;4!UBERON:0004663;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.65e-12,2;UBERON:0004801,1.65e-12,2;UBERON:0002456,3.62e-12,2;UBERON:0002369,1.12e-08,3;UBERON:0001235,1.12e-08,3;UBERON:0006858,1.12e-08,3;UBERON:0001911,9.11e-07,4;UBERON:0005333,9.11e-07,4;UBERON:0008425,9.11e-07,4;UBERON:0005311,9.11e-07,4;UBERON:0000415,9.63e-07,4;UBERON:0007240,9.63e-07,4;UBERON:0005742,9.63e-07,4;UBERON:0005734,9.63e-07,4;UBERON:0004664,9.63e-07,4;UBERON:0004663,9.63e-07,4 | |||
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| ||
|short_description=p@chr20:36846339..36846351,+ | |||
}} | }} |
Latest revision as of 13:52, 28 July 2015
Short description: | p@chr20:36846339..36846351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36846339..36846351, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.10e-23 | 1 |
myotube | 2.10e-23 | 1 |
epithelial cell of cervix | 1.65e-12 | 2 |
cortical cell of adrenal gland | 2.32e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
steroid hormone secreting cell | 1.12e-08 | 3 |
striated muscle cell | 7.70e-07 | 4 |
skeletal muscle myoblast | 7.70e-07 | 4 |
mammary gland epithelial cell | 9.11e-07 | 4 |
fibroblast of tunica adventitia of artery | 9.63e-07 | 4 |
fibroblast of the aortic adventitia | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.65e-12 | 2 |
cervix epithelium | 1.65e-12 | 2 |
internal thoracic artery | 3.62e-12 | 2 |
adrenal gland | 1.12e-08 | 3 |
adrenal cortex | 1.12e-08 | 3 |
adrenal/interrenal gland | 1.12e-08 | 3 |
mammary gland | 9.11e-07 | 4 |
mammary bud | 9.11e-07 | 4 |
mammary ridge | 9.11e-07 | 4 |
mammary placode | 9.11e-07 | 4 |
artery wall | 9.63e-07 | 4 |
tunica adventitia of artery | 9.63e-07 | 4 |
adventitia | 9.63e-07 | 4 |
tunica adventitia of blood vessel | 9.63e-07 | 4 |
aorta tunica adventitia | 9.63e-07 | 4 |
aorta wall | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.36e-07 | 14 |