FFCP PHASE1:Hg19::chr11:60260248..60260251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54860 | |EntrezGene=54860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13370 | |HGNC=13370 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXJ0,E9PIX5,F5GX98 | |UniProt=Q9NXJ0,E9PIX5,F5GX98 | ||
|association_with_transcript=0bp_to_ENST00000016913,ENST00000525951,ENST00000526784,ENST00000537076,NM_001164470,NM_017716,uc001npr.2,uc009ynb.2_5end | |association_with_transcript=0bp_to_ENST00000016913,ENST00000525951,ENST00000526784,ENST00000537076,NM_001164470,NM_017716,uc001npr.2,uc009ynb.2_5end | ||
|cluster_id=chr11:60260248..60260251,+ | |||
|coexpression_cluster_id=C201 | |coexpression_cluster_id=C201 | ||
|description=CAGE_peak_1_at_MS4A12_5end | |description=CAGE_peak_1_at_MS4A12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.99e-50;1 | |ontology_enrichment_development_v019=UBERON:0001045;3.99e-50;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.93e-89!11;UBERON:0001155!2.16e-70!9;UBERON:0001154!1.48e-40!1;UBERON:0001153!1.48e-40!1;UBERON:0000160!9.60e-36!27;UBERON:0004907!2.34e-32!5;UBERON:0005409!5.37e-28!35;UBERON:0001052!3.79e-11!4;UBERON:0000063!7.66e-11!97;UBERON:0001046!2.46e-09!19;UBERON:0004921!3.09e-08!129;UBERON:0004185!3.09e-08!129;UBERON:0001007!5.97e-07!155;UBERON:0001555!5.97e-07!155;UBERON:0007026!5.97e-07!155 | |ontology_enrichment_uberon=UBERON:0000059!1.93e-89!11;UBERON:0001155!2.16e-70!9;UBERON:0001154!1.48e-40!1;UBERON:0001153!1.48e-40!1;UBERON:0000160!9.60e-36!27;UBERON:0004907!2.34e-32!5;UBERON:0005409!5.37e-28!35;UBERON:0001052!3.79e-11!4;UBERON:0000063!7.66e-11!97;UBERON:0001046!2.46e-09!19;UBERON:0004921!3.09e-08!129;UBERON:0004185!3.09e-08!129;UBERON:0001007!5.97e-07!155;UBERON:0001555!5.97e-07!155;UBERON:0007026!5.97e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001155;1.37e-87;9!UBERON:0000059;6.65e-72;11!UBERON:0001154;3.99e-50;1!UBERON:0001153;3.99e-50;1!UBERON:0009854;3.99e-50;1!UBERON:0000160;2.03e-44;17!UBERON:0005409;5.16e-35;22!UBERON:0004921;1.08e-23;33!UBERON:0009856;1.13e-13;4!UBERON:0004907;3.26e-11;5!UBERON:0001555;2.01e-09;54!UBERON:0001007;6.37e-09;81 | |ontology_enrichment_uberon_v019=UBERON:0001155;1.37e-87;9!UBERON:0000059;6.65e-72;11!UBERON:0001154;3.99e-50;1!UBERON:0001153;3.99e-50;1!UBERON:0009854;3.99e-50;1!UBERON:0000160;2.03e-44;17!UBERON:0005409;5.16e-35;22!UBERON:0004921;1.08e-23;33!UBERON:0009856;1.13e-13;4!UBERON:0004907;3.26e-11;5!UBERON:0001555;2.01e-09;54!UBERON:0001007;6.37e-09;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.37e-87,9;UBERON:0000059,6.65e-72,11;UBERON:0001154,3.99e-50,1;UBERON:0001153,3.99e-50,1;UBERON:0001045,3.99e-50,1;UBERON:0000160,2.03e-44,17;UBERON:0005409,4.21e-31,25;UBERON:0004907,3.26e-11,5;UBERON:0004921,1.75e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0244671008066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8483817945122,4.24596309616028,34.8287182612167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0244671008066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8483817945122,4.24596309616028,34.8287182612167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@MS4A12 | |short_description=p1@MS4A12 | ||
}} | }} |
Latest revision as of 13:43, 18 September 2015
Short description: | p1@MS4A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MS4A12_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000016913, ENST00000525951, ENST00000526784, ENST00000537076, NM_001164470, NM_017716, uc001npr.2, uc009ynb.2_5end |
EntrezGene: | MS4A12 |
HGNC: | 13370 |
UniProt: | Q9NXJ0E9PIX5F5GX98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 1.37e-87 | 9 |
large intestine | 6.65e-72 | 11 |
vermiform appendix | 3.99e-50 | 1 |
caecum | 3.99e-50 | 1 |
midgut | 3.99e-50 | 1 |
intestine | 2.03e-44 | 17 |
gastrointestinal system | 4.21e-31 | 25 |
lower digestive tract | 3.26e-11 | 5 |
subdivision of digestive tract | 1.75e-07 | 118 |