FFCP PHASE1:Hg19::chr16:11089706..11089712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:11089706..11089712,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_at_chr16:11089706..11089712,+ | |description=CAGE_peak_at_chr16:11089706..11089712,+ | ||
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|ontology_enrichment_celltype=CL:0000622!3.52e-16!5;CL:0002623!1.61e-15!3;CL:0000154!1.67e-13!6;CL:0002076!2.12e-11!43;CL:0002327!2.91e-11!4;CL:0000453!5.37e-10!5;CL:0000990!3.15e-09!8;CL:0002159!3.20e-09!13;CL:0000150!5.01e-09!9;CL:0002251!8.47e-08!21;CL:0000223!9.71e-08!59;CL:0002166!1.04e-07!3;CL:0002621!1.44e-07!3;CL:0000451!1.49e-07!10;CL:0000080!1.61e-07!6;CL:0002231!3.42e-07!3 | |ontology_enrichment_celltype=CL:0000622!3.52e-16!5;CL:0002623!1.61e-15!3;CL:0000154!1.67e-13!6;CL:0002076!2.12e-11!43;CL:0002327!2.91e-11!4;CL:0000453!5.37e-10!5;CL:0000990!3.15e-09!8;CL:0002159!3.20e-09!13;CL:0000150!5.01e-09!9;CL:0002251!8.47e-08!21;CL:0000223!9.71e-08!59;CL:0002166!1.04e-07!3;CL:0002621!1.44e-07!3;CL:0000451!1.49e-07!10;CL:0000080!1.61e-07!6;CL:0002231!3.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.98e-45;5!CL:0000990;1.50e-25;8!CL:0000451;4.65e-21;10!CL:0002166;1.41e-09;3!CL:0002623;1.74e-09;3 | |ontology_enrichment_celltype_v019=CL:0000453;2.98e-45;5!CL:0000990;1.50e-25;8!CL:0000451;4.65e-21;10!CL:0002166;1.41e-09;3!CL:0002623;1.74e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.98e-45,5;CL:0000990,1.50e-25,8;CL:0000451,4.65e-21,10;CL:0002166,1.41e-09,3;CL:0002623,1.67e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;7.62e-26;1!DOID:0060061;7.62e-26;1!DOID:8691;7.62e-26;1!DOID:0060058;5.98e-11;10 | |ontology_enrichment_disease_v019=DOID:0060060;7.62e-26;1!DOID:0060061;7.62e-26;1!DOID:8691;7.62e-26;1!DOID:0060058;5.98e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.62e-26,1;DOID:0060061,7.62e-26,1;DOID:8691,7.62e-26,1;DOID:0060058,5.98e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0003408!3.42e-12!10;UBERON:0004177!2.25e-11!7;UBERON:0001911!2.91e-11!4;UBERON:0005333!2.91e-11!4;UBERON:0008425!2.91e-11!4;UBERON:0005311!2.91e-11!4;UBERON:0001044!5.50e-08!6;UBERON:0003293!5.50e-08!6;UBERON:0003294!5.50e-08!6;UBERON:0010047!5.50e-08!6;UBERON:0000167!5.50e-08!6;UBERON:0000166!8.47e-08!21;UBERON:0002530!9.20e-08!59;UBERON:0000161!1.35e-07!35;UBERON:0001949!1.44e-07!3;UBERON:0002106!2.12e-07!3;UBERON:0004854!2.12e-07!3;UBERON:0009034!2.12e-07!3;UBERON:0002095!2.12e-07!3;UBERON:0004782!2.12e-07!3;UBERON:0003281!2.12e-07!3;UBERON:0009664!2.12e-07!3;UBERON:0002296!2.12e-07!3;UBERON:0005602!2.12e-07!3;UBERON:0001179!2.12e-07!3;UBERON:0006293!2.12e-07!3;UBERON:0002365!8.56e-07!31;UBERON:0002330!8.56e-07!31 | |ontology_enrichment_uberon=UBERON:0003408!3.42e-12!10;UBERON:0004177!2.25e-11!7;UBERON:0001911!2.91e-11!4;UBERON:0005333!2.91e-11!4;UBERON:0008425!2.91e-11!4;UBERON:0005311!2.91e-11!4;UBERON:0001044!5.50e-08!6;UBERON:0003293!5.50e-08!6;UBERON:0003294!5.50e-08!6;UBERON:0010047!5.50e-08!6;UBERON:0000167!5.50e-08!6;UBERON:0000166!8.47e-08!21;UBERON:0002530!9.20e-08!59;UBERON:0000161!1.35e-07!35;UBERON:0001949!1.44e-07!3;UBERON:0002106!2.12e-07!3;UBERON:0004854!2.12e-07!3;UBERON:0009034!2.12e-07!3;UBERON:0002095!2.12e-07!3;UBERON:0004782!2.12e-07!3;UBERON:0003281!2.12e-07!3;UBERON:0009664!2.12e-07!3;UBERON:0002296!2.12e-07!3;UBERON:0005602!2.12e-07!3;UBERON:0001179!2.12e-07!3;UBERON:0006293!2.12e-07!3;UBERON:0002365!8.56e-07!31;UBERON:0002330!8.56e-07!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3!UBERON:0001708;1.69e-07;4!UBERON:0008895;1.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3!UBERON:0001708;1.69e-07;4!UBERON:0008895;1.69e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3;UBERON:0001708,1.69e-07,4;UBERON:0008895,1.69e-07,4 | |||
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|short_description=p@chr16:11089706..11089712,+ | |short_description=p@chr16:11089706..11089712,+ | ||
}} | }} |
Latest revision as of 06:09, 25 July 2015
Short description: | p@chr16:11089706..11089712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:11089706..11089712, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.98e-45 | 5 |
conventional dendritic cell | 1.50e-25 | 8 |
dendritic cell | 4.65e-21 | 10 |
epithelial cell of Malassez | 1.41e-09 | 3 |
acinar cell of salivary gland | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |
jaw skeleton | 1.69e-07 | 4 |
splanchnocranium | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.62e-26 | 1 |
cutaneous T cell lymphoma | 7.62e-26 | 1 |
mycosis fungoides | 7.62e-26 | 1 |
lymphoma | 5.98e-11 | 10 |