FFCP PHASE1:Hg19::chr20:42839138..42839152,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:42839138..42839152,-
|short_description=p4@C20orf111
|description=CAGE_peak_4_at_C20orf111_5end
|association_with_transcript=-422bp_to_ENST00000372970_5en...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51526 | |EntrezGene=51526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16105 | |HGNC=16105 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NX31 | |UniProt=Q9NX31 | ||
|association_with_transcript=-422bp_to_ENST00000372970_5end | |||
|cluster_id=chr20:42839138..42839152,- | |||
|description=CAGE_peak_4_at_C20orf111_5end | |||
|id=chr20:42839138..42839152,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000771;5.99e-09;2!CL:0001014;1.35e-08;2!CL:0001016;1.35e-08;2!CL:0000081;1.48e-08;11!CL:0000094;8.63e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,5.37e-09,2;CL:0000081,1.23e-08,11;CL:0001014,1.44e-08,2;CL:0001016,1.44e-08,2;CL:0000076,3.26e-08,63;CL:0000094,7.06e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.20e-11!106;DOID:0050687!3.30e-08!143;DOID:1749!6.98e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.60e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.80e-16,14;DOID:305,4.49e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.96e-08!169;UBERON:0000925!6.96e-08!169;UBERON:0006595!6.96e-08!169;UBERON:0001007!3.30e-07!155;UBERON:0001555!3.30e-07!155;UBERON:0007026!3.30e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.03e-08;4!UBERON:0004785;1.03e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.72e-09,4;UBERON:0004785,7.72e-09,4 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.247532705920093,0.994192127183747,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.739508020333575,0,0.142169232487422,0,0,0.200544447470142,1.08505435357926,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0,0,0,0.639337125799041,0.329851300186716,0,0.852449501065388,0,1.13477044938228,0,0.251248665256743,0,0,0.605399502633369,1.10483290796269,0.316462387440884,0.845021145247767,0.850417199860174,0,0,0.450530678524519,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,0,0.560508562981536,0,0.983548850569165,0,1.23360899399706,0,0.32592226663359,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0.724122019413995,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0,0,0,0,1.09288586487763,0.370784442784429,0.97364218096405,0.696518949197069,0,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,3.87780264148325,0.436094052142534,0,0,0.794455084879313,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0.826606249406124,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.206105058476878,0,0.37223371266318,0.337552664482532,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0,0,3.25057549622385,0.721879481669586,0.709840800239063,0.337169380156203,0.241011029883482,0.220587945464788,0.871517776369625,0.474541238222193,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.219500570817251,1.1240175325762,1.10581869652794,0.555530670951178,0.977424915930974,0,0,0,0,0.144366447761074,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0.268675568108545,0.871901815541886,0.383382679165211,0,0,0.414656231081544,0.576479813667846,0.75745460055828,0,0.381988425558278,0,0,0,0,0.571652865261156,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0.985153801009636,0.431255149719035,0.77005821767849,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0.981531933753119,0,0.271265023699736,0.415941723061614,0.178428988797162,0.630809660135739,0.819989904948992,0.300946099727719,0,0,0,0,0.781952530212746,0.195801157462741,0,0.413536052245775,0.862856803274467,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.655622074797121,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,1.0457418040996,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0,0.214840489736547,0.580066775656914,0.170453254832202,0,0.165284915360978,0,2.29702882490251,0.708104465988849,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.673554789078584,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0.569647187174163,0,0,0,0.540031437238115,0,0.534120355637366,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.334330152832435,0.852408440419239,1.43246690842614,0.296964680832639,1.22864280839693,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0.503865495708552,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,0.437299999980979,0,3.98277068999249,0.508507300585533,12.5285471337006,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.21787692703798,2.78847488557207,0.153900517007594,0.113942055847001,0.23056390438806,0.179515288819544,0.54323685961004,0.638002319463839,0.274792780205587,0,0,0,0.332423363800313,0,0.392125068635479,0.167821586975843,0.189753732724185,0,0,0.489698424477443,0.141353071433941,0,0,0,1.83309043480088,4.74433805888995,1.48276726735803,1.8795950910982,0.067401132980677,0,0,0,3.52196314077761,0,0,0,0,0.379119477770928,0.60129367765797,0,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0.138674673013139,0.867798691675654,7.05545261383519,1.56706571844725,0.17472666824203,0.171986032471617,0.870806981601766,2.11959019549938,1.14961639874493,0.193978032976839,0.617792886840502,0,0,0.19871461170299,0,0,0,0.213452994739353,0.999048047910651,0.288180834308212,0.229073192331831,0.857974989309823,0.14405479798815,0.124252535565433,0.942776138467182,0,0,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0.0984274815147488,0.254019996197353,0,0,0,0.275078873194468,0.415440338029185,1.349843349309,13.1546332274851,0.0607495566580247,4.02521625119119,0.157611414598396,0,0.211200673038813,0.35857467866569,1.72723677587501,0,0,0,0,0,0,0,0,0.170388021785422,0.566560457600628,0.146552233678082,0,0,0,0.171086837884329,2.11444506695002,0.106787412567695,0,0,0,0,0.243585196761792,1.91502377331055,0,0,0,0.327872630709804,0.785270481251171,0,0,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,1.34940933649081,0,0,0.53168342911599,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,3.21662387062389,0.782982875895635,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0.512483037175893,0,1.51929978088691,0,0,0,0.327130788511688,0.327609848846413,0.245772908753719,0.422624246717254,0.79994958341972,0,0,0,0.184105950251841,0.419638523158333,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,1.37406805901436,0.943757786781923,2.01771458373847,1.84841065840541,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.982631505060581,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0.527613733078862,0.638812138197976,0,0,0,0,0.532214220975833,0.115233987555779,0.171488009437418,0.0679697329768317,0,0.945550727071746,1.55723962648897,0.156986185701028,0,0.840816489941367,0,0.431855182437243,0,0,0,0,0.173858272302579,0,0.62164849248911,0.17071847709395,1.38251932362818,0.430227358820278,0.473328002922261,0.255640214277473,0,3.89481676524885,0,0,0.111855431797792,0.098150233615243,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0,0.561689566824178,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.101988829741982,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0.434523000071005,1.12131862580613,0.0636471582781649,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.286888821570705,0.665320713092027,0.0814032686109745,2.45472895518746,0,1.07790242527904,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0.893922188854576,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.247532705920093,0.994192127183747,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.739508020333575,0,0.142169232487422,0,0,0.200544447470142,1.08505435357926,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0,0,0,0.639337125799041,0.329851300186716,0,0.852449501065388,0,1.13477044938228,0,0.251248665256743,0,0,0.605399502633369,1.10483290796269,0.316462387440884,0.845021145247767,0.850417199860174,0,0,0.450530678524519,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,0,0.560508562981536,0,0.983548850569165,0,1.23360899399706,0,0.32592226663359,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0.724122019413995,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0,0,0,0,1.09288586487763,0.370784442784429,0.97364218096405,0.696518949197069,0,0.238490624305342,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,3.87780264148325,0.436094052142534,0,0,0.794455084879313,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0.826606249406124,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0.206105058476878,0,0.37223371266318,0.337552664482532,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,0,0,3.25057549622385,0.721879481669586,0.709840800239063,0.337169380156203,0.241011029883482,0.220587945464788,0.871517776369625,0.474541238222193,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.219500570817251,1.1240175325762,1.10581869652794,0.555530670951178,0.977424915930974,0,0,0,0,0.144366447761074,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0.268675568108545,0.871901815541886,0.383382679165211,0,0,0.414656231081544,0.576479813667846,0.75745460055828,0,0.381988425558278,0,0,0,0,0.571652865261156,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0.985153801009636,0.431255149719035,0.77005821767849,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0.981531933753119,0,0.271265023699736,0.415941723061614,0.178428988797162,0.630809660135739,0.819989904948992,0.300946099727719,0,0,0,0,0.781952530212746,0.195801157462741,0,0.413536052245775,0.862856803274467,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.655622074797121,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,1.0457418040996,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0,0.214840489736547,0.580066775656914,0.170453254832202,0,0.165284915360978,0,2.29702882490251,0.708104465988849,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.673554789078584,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0.569647187174163,0,0,0,0.540031437238115,0,0.534120355637366,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.334330152832435,0.852408440419239,1.43246690842614,0.296964680832639,1.22864280839693,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0.503865495708552,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,1.5625665665114,0.437299999980979,0,3.98277068999249,0.508507300585533,12.5285471337006,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.21787692703798,2.78847488557207,0.153900517007594,0.113942055847001,0.23056390438806,0.179515288819544,0.54323685961004,0.638002319463839,0.274792780205587,0,0,0,0.332423363800313,0,0.392125068635479,0.167821586975843,0.189753732724185,0,0,0.489698424477443,0.141353071433941,0,0,0,1.83309043480088,4.74433805888995,1.48276726735803,1.8795950910982,0.067401132980677,0,0,0,3.52196314077761,0,0,0,0,0.379119477770928,0.60129367765797,0,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0.138674673013139,0.867798691675654,7.05545261383519,1.56706571844725,0.17472666824203,0.171986032471617,0.870806981601766,2.11959019549938,1.14961639874493,0.193978032976839,0.617792886840502,0,0,0.19871461170299,0,0,0,0.213452994739353,0.999048047910651,0.288180834308212,0.229073192331831,0.857974989309823,0.14405479798815,0.124252535565433,0.942776138467182,0,0,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0.0984274815147488,0.254019996197353,0,0,0,0.275078873194468,0.415440338029185,1.349843349309,13.1546332274851,0.0607495566580247,4.02521625119119,0.157611414598396,0,0.211200673038813,0.35857467866569,1.72723677587501,0,0,0,0,0,0,0,0,0.170388021785422,0.566560457600628,0.146552233678082,0,0,0,0.171086837884329,2.11444506695002,0.106787412567695,0,0,0,0,0.243585196761792,1.91502377331055,0,0,0,0.327872630709804,0.785270481251171,0,0,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,1.34940933649081,0,0,0.53168342911599,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,3.21662387062389,0.782982875895635,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0.512483037175893,0,1.51929978088691,0,0,0,0.327130788511688,0.327609848846413,0.245772908753719,0.422624246717254,0.79994958341972,0,0,0,0.184105950251841,0.419638523158333,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,1.37406805901436,0.943757786781923,2.01771458373847,1.84841065840541,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.982631505060581,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0.527613733078862,0.638812138197976,0,0,0,0,0.532214220975833,0.115233987555779,0.171488009437418,0.0679697329768317,0,0.945550727071746,1.55723962648897,0.156986185701028,0,0.840816489941367,0,0.431855182437243,0,0,0,0,0.173858272302579,0,0.62164849248911,0.17071847709395,1.38251932362818,0.430227358820278,0.473328002922261,0.255640214277473,0,3.89481676524885,0,0,0.111855431797792,0.098150233615243,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0,0.561689566824178,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.101988829741982,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0.434523000071005,1.12131862580613,0.0636471582781649,0,0.435433495793923,0.342233301085281,0.0673520530145875,0.286888821570705,0.665320713092027,0.0814032686109745,2.45472895518746,0,1.07790242527904,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@C20orf111 | |||
}} | }} |
Latest revision as of 07:37, 16 September 2015
Short description: | p4@C20orf111 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C20orf111_5end |
Coexpression cluster: | NA |
Association with transcript: | -422bp_to_ENST00000372970_5end |
EntrezGene: | C20orf111 |
HGNC: | 16105 |
UniProt: | Q9NX31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 5.37e-09 | 2 |
blood cell | 1.23e-08 | 11 |
CD1a-positive Langerhans cell | 1.44e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.44e-08 | 2 |
squamous epithelial cell | 3.26e-08 | 63 |
granulocyte | 7.06e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.72e-09 | 4 |
respiratory system mucosa | 7.72e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.80e-16 | 14 |
carcinoma | 4.49e-08 | 106 |