FFCP PHASE1:Hg19::chr1:110928716..110928722,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:110928716..110928722,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr1:110928716..110928722,+ | |description=CAGE_peak_at_chr1:110928716..110928722,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!2.38e-19!2;CL:0000765!2.38e-19!2;CL:0000050!2.38e-19!2;CL:0000038!2.38e-19!2;CL:0000558!2.38e-19!2;CL:0000547!2.38e-19!2;CL:0000549!2.38e-19!2;CL:0000550!2.38e-19!2;CL:0000552!2.38e-19!2;CL:0000864!3.01e-10!1;CL:0000091!3.01e-10!1 | |ontology_enrichment_celltype=CL:0000764!2.38e-19!2;CL:0000765!2.38e-19!2;CL:0000050!2.38e-19!2;CL:0000038!2.38e-19!2;CL:0000558!2.38e-19!2;CL:0000547!2.38e-19!2;CL:0000549!2.38e-19!2;CL:0000550!2.38e-19!2;CL:0000552!2.38e-19!2;CL:0000864!3.01e-10!1;CL:0000091!3.01e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.43e-12;2!CL:0000558;3.43e-12;2 | |ontology_enrichment_celltype_v019=CL:0000764;3.43e-12;2!CL:0000558;3.43e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.24e-12,2;CL:0000765,3.24e-12,2;CL:0000050,3.24e-12,2;CL:0000038,3.24e-12,2;CL:0000558,3.24e-12,2;CL:0000547,3.24e-12,2;CL:0000549,3.24e-12,2;CL:0000550,3.24e-12,2;CL:0000552,3.24e-12,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3571!3.01e-10!1 | |ontology_enrichment_disease=DOID:3571!3.01e-10!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.29e-38!15;UBERON:0000179!1.29e-38!15;UBERON:0000463!1.29e-38!15;UBERON:0007023!2.33e-11!115;UBERON:0002702!1.57e-10!1;UBERON:0002193!4.44e-08!112;UBERON:0002390!2.05e-07!102;UBERON:0003061!2.05e-07!102;UBERON:0004535!7.20e-07!110 | |ontology_enrichment_uberon=UBERON:0000178!1.29e-38!15;UBERON:0000179!1.29e-38!15;UBERON:0000463!1.29e-38!15;UBERON:0007023!2.33e-11!115;UBERON:0002702!1.57e-10!1;UBERON:0002193!4.44e-08!112;UBERON:0002390!2.05e-07!102;UBERON:0003061!2.05e-07!102;UBERON:0004535!7.20e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.52e-53;15!UBERON:0000179;8.52e-53;15!UBERON:0000463;8.52e-53;15!UBERON:0002390;6.02e-25;32!UBERON:0002193;5.35e-17;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.52e-53;15!UBERON:0000179;8.52e-53;15!UBERON:0000463;8.52e-53;15!UBERON:0002390;6.02e-25;32!UBERON:0002193;5.35e-17;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.32e-53,15;UBERON:0000179,9.32e-53,15;UBERON:0000463,9.32e-53,15;UBERON:0007023,2.28e-09,114;UBERON:0002390,4.77e-08,98;UBERON:0003061,4.77e-08,98;UBERON:0004535,2.67e-07,109;UBERON:0002193,2.67e-07,108;UBERON:0001009,4.22e-07,112 | |||
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|short_description=p@chr1:110928716..110928722,+ | |short_description=p@chr1:110928716..110928722,+ | ||
}} | }} |
Latest revision as of 19:31, 27 July 2015
Short description: | p@chr1:110928716..110928722, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110928716..110928722, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.24e-12 | 2 |
erythroblast | 3.24e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.24e-12 | 2 |
erythroid progenitor cell | 3.24e-12 | 2 |
reticulocyte | 3.24e-12 | 2 |
proerythroblast | 3.24e-12 | 2 |
basophilic erythroblast | 3.24e-12 | 2 |
polychromatophilic erythroblast | 3.24e-12 | 2 |
orthochromatic erythroblast | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.32e-53 | 15 |
haemolymphatic fluid | 9.32e-53 | 15 |
organism substance | 9.32e-53 | 15 |
adult organism | 2.28e-09 | 114 |
hematopoietic system | 4.77e-08 | 98 |
blood island | 4.77e-08 | 98 |
cardiovascular system | 2.67e-07 | 109 |
hemolymphoid system | 2.67e-07 | 108 |
circulatory system | 4.22e-07 | 112 |