FFCP PHASE1:Hg19::chr3:189863313..189863317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:189863313..189863317,+ | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_at_chr3:189863313..189863317,+ | |description=CAGE_peak_at_chr3:189863313..189863317,+ | ||
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|ontology_enrichment_celltype=CL:0000540!4.71e-12!6;CL:0000031!4.71e-12!6;CL:0000404!4.71e-12!6;CL:0000047!3.66e-09!8;CL:0000946!7.18e-09!1;CL:0000786!7.18e-09!1;CL:0000980!7.18e-09!1 | |ontology_enrichment_celltype=CL:0000540!4.71e-12!6;CL:0000031!4.71e-12!6;CL:0000404!4.71e-12!6;CL:0000047!3.66e-09!8;CL:0000946!7.18e-09!1;CL:0000786!7.18e-09!1;CL:0000980!7.18e-09!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;5.96e-34;3!DOID:3908;5.15e-21;5!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |ontology_enrichment_disease_v019=DOID:4556;5.96e-34;3!DOID:3908;5.15e-21;5!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,5.96e-34,3;DOID:3908,5.15e-21,5;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:189863313..189863317,+ | |short_description=p@chr3:189863313..189863317,+ | ||
}} | }} |
Latest revision as of 19:25, 29 July 2015
Short description: | p@chr3:189863313..189863317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:189863313..189863317, + |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.96e-34 | 3 |
non-small cell lung carcinoma | 5.15e-21 | 5 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |