FFCP PHASE1:Hg19::chr5:66118077..66118092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:66118077..66118092,+ | |||
|coexpression_cluster_id=C388 | |coexpression_cluster_id=C388 | ||
|description=CAGE_peak_at_chr5:66118077..66118092,+ | |description=CAGE_peak_at_chr5:66118077..66118092,+ | ||
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|ontology_enrichment_celltype=CL:0000080!8.72e-10!6;CL:0002127!9.10e-08!1;CL:0000914!9.10e-08!1;CL:0000911!9.10e-08!1;CL:0000814!9.10e-08!1;CL:0002042!9.10e-08!1;CL:0002039!9.10e-08!1;CL:0002040!9.10e-08!1;CL:0002041!9.10e-08!1 | |ontology_enrichment_celltype=CL:0000080!8.72e-10!6;CL:0002127!9.10e-08!1;CL:0000914!9.10e-08!1;CL:0000911!9.10e-08!1;CL:0000814!9.10e-08!1;CL:0002042!9.10e-08!1;CL:0002039!9.10e-08!1;CL:0002040!9.10e-08!1;CL:0002041!9.10e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;7.05e-34;1!CL:0000911;7.05e-34;1!CL:0000814;7.05e-34;1 | |ontology_enrichment_celltype_v019=CL:0002127;7.05e-34;1!CL:0000911;7.05e-34;1!CL:0000814;7.05e-34;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.85e-34,1;CL:0000914,9.85e-34,1;CL:0000911,9.85e-34,1;CL:0000814,9.85e-34,1;CL:0002042,9.85e-34,1;CL:0002039,9.85e-34,1;CL:0002040,9.85e-34,1;CL:0002041,9.85e-34,1;CL:0000893,1.27e-17,2;CL:0002489,1.27e-17,2;CL:0000809,1.27e-17,2;CL:0000808,1.27e-17,2;CL:0000894,1.27e-17,2;CL:0000806,1.27e-17,2;CL:0000807,1.27e-17,2;CL:0000805,1.27e-17,2;CL:0002425,1.27e-17,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.07e-17;2 | |ontology_enrichment_development_v019=CL:0002425;1.07e-17;2 | ||
|ontology_enrichment_disease=DOID:0060060!3.40e-07!1;DOID:0060061!3.40e-07!1;DOID:8691!3.40e-07!1 | |ontology_enrichment_disease=DOID:0060060!3.40e-07!1;DOID:0060061!3.40e-07!1;DOID:8691!3.40e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002135!2.07e-07!1;UBERON:0001282!4.34e-07!1;UBERON:0009842!4.34e-07!1;UBERON:0003704!4.34e-07!1;UBERON:0001171!4.34e-07!1;UBERON:0001172!4.34e-07!1;UBERON:0002370!5.55e-07!4;UBERON:0005058!5.55e-07!4;UBERON:0009113!5.55e-07!4;UBERON:0003295!5.55e-07!4;UBERON:0005562!5.55e-07!4;UBERON:0000178!9.44e-07!15;UBERON:0000179!9.44e-07!15;UBERON:0000463!9.44e-07!15 | |ontology_enrichment_uberon=UBERON:0002135!2.07e-07!1;UBERON:0001282!4.34e-07!1;UBERON:0009842!4.34e-07!1;UBERON:0003704!4.34e-07!1;UBERON:0001171!4.34e-07!1;UBERON:0001172!4.34e-07!1;UBERON:0002370!5.55e-07!4;UBERON:0005058!5.55e-07!4;UBERON:0009113!5.55e-07!4;UBERON:0003295!5.55e-07!4;UBERON:0005562!5.55e-07!4;UBERON:0000178!9.44e-07!15;UBERON:0000179!9.44e-07!15;UBERON:0000463!9.44e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-09,4;UBERON:0005058,1.70e-09,4;UBERON:0009113,1.70e-09,4;UBERON:0003295,1.70e-09,4;UBERON:0005562,1.70e-09,4;UBERON:0003351,9.49e-07,6 | |||
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|short_description=p@chr5:66118077..66118092,+ | |short_description=p@chr5:66118077..66118092,+ | ||
}} | }} |
Latest revision as of 15:49, 30 July 2015
Short description: | p@chr5:66118077..66118092, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:66118077..66118092, + |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.85e-34 | 1 |
immature NK T cell | 9.85e-34 | 1 |
effector T cell | 9.85e-34 | 1 |
mature NK T cell | 9.85e-34 | 1 |
immature NK T cell stage IV | 9.85e-34 | 1 |
immature NK T cell stage I | 9.85e-34 | 1 |
immature NK T cell stage II | 9.85e-34 | 1 |
immature NK T cell stage III | 9.85e-34 | 1 |
thymocyte | 1.27e-17 | 2 |
double negative thymocyte | 1.27e-17 | 2 |
double-positive, alpha-beta thymocyte | 1.27e-17 | 2 |
DN4 thymocyte | 1.27e-17 | 2 |
DN1 thymic pro-T cell | 1.27e-17 | 2 |
DN2 thymocyte | 1.27e-17 | 2 |
DN3 thymocyte | 1.27e-17 | 2 |
immature single positive thymocyte | 1.27e-17 | 2 |
early T lineage precursor | 1.27e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.70e-09 | 4 |
hemolymphoid system gland | 1.70e-09 | 4 |
thymic region | 1.70e-09 | 4 |
pharyngeal gland | 1.70e-09 | 4 |
thymus primordium | 1.70e-09 | 4 |
pharyngeal epithelium | 9.49e-07 | 6 |