FFCP PHASE1:Hg19::chr11:2159700..2159730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-284bp_to_BC017277_5end | |association_with_transcript=-284bp_to_BC017277_5end | ||
|cluster_id=chr11:2159700..2159730,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_6_at_BC017277_5end | |description=CAGE_peak_6_at_BC017277_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.37e-28;19!CL:0002541;8.60e-13;3!CL:0002577;2.67e-12;3!CL:0002575;3.10e-09;2!CL:0002536;3.64e-09;2!CL:0000244;1.32e-08;4!CL:0000731;1.32e-08;4!CL:0002537;4.30e-08;5 | |ontology_enrichment_celltype_v019=CL:0000349;4.37e-28;19!CL:0002541;8.60e-13;3!CL:0002577;2.67e-12;3!CL:0002575;3.10e-09;2!CL:0002536;3.64e-09;2!CL:0000244;1.32e-08;4!CL:0000731;1.32e-08;4!CL:0002537;4.30e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.61e-28,19;CL:0002541,7.65e-13,3;CL:0002577,2.12e-12,3;CL:0002575,3.17e-09,2;CL:0002536,3.71e-09,2;CL:0000244,1.12e-08,4;CL:0000731,1.12e-08,4;CL:0002537,4.25e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.66e-09;11!UBERON:0009497;1.55e-07;13 | |ontology_enrichment_development_v019=UBERON:0004161;5.66e-09;11!UBERON:0009497;1.55e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.80e-15!14;UBERON:0000158!1.80e-15!14;UBERON:0000478!2.94e-12!24;UBERON:0003124!2.05e-11!7;UBERON:0001987!4.08e-07!4;UBERON:0004340!4.08e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!1.80e-15!14;UBERON:0000158!1.80e-15!14;UBERON:0000478!2.94e-12!24;UBERON:0003124!2.05e-11!7;UBERON:0001987!4.08e-07!4;UBERON:0004340!4.08e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.07e-29;24!UBERON:0005631;4.42e-25;10!UBERON:0000158;4.42e-25;10!UBERON:0001987;8.51e-16;4!UBERON:0000305;1.15e-14;7!UBERON:0003124;8.60e-13;3!UBERON:0000920;8.60e-13;3!UBERON:0000365;5.67e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.07e-29;24!UBERON:0005631;4.42e-25;10!UBERON:0000158;4.42e-25;10!UBERON:0001987;8.51e-16;4!UBERON:0000305;1.15e-14;7!UBERON:0003124;8.60e-13;3!UBERON:0000920;8.60e-13;3!UBERON:0000365;5.67e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.44e-39,14;UBERON:0000158,5.44e-39,14;UBERON:0000478,9.07e-30,24;UBERON:0003124,5.67e-27,7;UBERON:0001987,6.90e-16,4;UBERON:0004340,6.90e-16,4;UBERON:0000305,1.15e-14,7;UBERON:0000920,7.65e-13,3;UBERON:0004871,8.67e-13,8;UBERON:0004923,2.20e-07,66;UBERON:0000365,4.98e-07,5 | |||
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| ||
|short_description=p6@BC017277 | |short_description=p6@BC017277 | ||
}} | }} |
Latest revision as of 21:02, 23 July 2015
Short description: | p6@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -284bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.61e-28 | 19 |
chorionic membrane mesenchymal stem cell | 7.65e-13 | 3 |
placental epithelial cell | 2.12e-12 | 3 |
central nervous system pericyte | 3.17e-09 | 2 |
amniotic epithelial cell | 3.71e-09 | 2 |
transitional epithelial cell | 1.12e-08 | 4 |
urothelial cell | 1.12e-08 | 4 |
amnion mesenchymal stem cell | 4.25e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.44e-39 | 14 |
membranous layer | 5.44e-39 | 14 |
extraembryonic structure | 9.07e-30 | 24 |
chorion | 5.67e-27 | 7 |
placenta | 6.90e-16 | 4 |
allantois | 6.90e-16 | 4 |
amnion | 1.15e-14 | 7 |
egg chorion | 7.65e-13 | 3 |
somatic layer of lateral plate mesoderm | 8.67e-13 | 8 |
organ component layer | 2.20e-07 | 66 |
urothelium | 4.98e-07 | 5 |