FFCP PHASE1:Hg19::chr11:111888043..111888056,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85458 | |EntrezGene=85458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23695 | |HGNC=23695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-241bp_to_ENST00000526418_5end | |association_with_transcript=-241bp_to_ENST00000526418_5end | ||
|cluster_id=chr11:111888043..111888056,+ | |||
|coexpression_cluster_id=C173 | |coexpression_cluster_id=C173 | ||
|description=CAGE_peak_22_at_DIXDC1_5end | |description=CAGE_peak_22_at_DIXDC1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!3.69e-25!15;CL:0000188!9.57e-11!9;CL:0000325!4.51e-10!39;CL:0000128!3.29e-08!7;CL:0000126!3.29e-08!7;CL:0000127!3.29e-08!7;CL:0002453!3.29e-08!7;CL:0002615!4.72e-08!3;CL:0002605!7.79e-08!3;CL:0000064!2.16e-07!3;CL:0005012!2.16e-07!3;CL:0000067!2.16e-07!3;CL:0002304!2.16e-07!3;CL:0002580!2.63e-07!3;CL:0000594!3.06e-07!3 | |ontology_enrichment_celltype=CL:0000136!3.69e-25!15;CL:0000188!9.57e-11!9;CL:0000325!4.51e-10!39;CL:0000128!3.29e-08!7;CL:0000126!3.29e-08!7;CL:0000127!3.29e-08!7;CL:0002453!3.29e-08!7;CL:0002615!4.72e-08!3;CL:0002605!7.79e-08!3;CL:0000064!2.16e-07!3;CL:0005012!2.16e-07!3;CL:0000067!2.16e-07!3;CL:0002304!2.16e-07!3;CL:0002580!2.63e-07!3;CL:0000594!3.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.96e-68;13!CL:0002521;7.25e-16;3!CL:0002615;7.25e-16;3!CL:0002605;1.32e-15;3!CL:0000128;3.35e-07;7!CL:0000126;3.35e-07;7!CL:0000127;3.35e-07;7!CL:0002617;4.82e-07;2!CL:0000047;8.52e-07;2!CL:0002561;8.52e-07;2 | |ontology_enrichment_celltype_v019=CL:0000136;2.96e-68;13!CL:0002521;7.25e-16;3!CL:0002615;7.25e-16;3!CL:0002605;1.32e-15;3!CL:0000128;3.35e-07;7!CL:0000126;3.35e-07;7!CL:0000127;3.35e-07;7!CL:0002617;4.82e-07;2!CL:0000047;8.52e-07;2!CL:0002561;8.52e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.65e-59,15;CL:0002615,5.38e-16,3;CL:0002521,6.26e-16,3;CL:0002605,1.91e-15,3;CL:0000128,3.91e-07,7;CL:0000126,3.91e-07,7;CL:0000127,3.91e-07,7;CL:0002453,3.91e-07,7;CL:0002617,4.83e-07,2;CL:0002561,6.07e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!9.82e-08!10;UBERON:0001778!2.16e-07!3;UBERON:0001775!2.16e-07!3;UBERON:0001443!5.94e-07!11 | |ontology_enrichment_uberon=UBERON:0000310!9.82e-08!10;UBERON:0001778!2.16e-07!3;UBERON:0001775!2.16e-07!3;UBERON:0001443!5.94e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.25e-16;3!UBERON:0007195;2.46e-12;1!UBERON:0002072;6.80e-10;5!UBERON:0003688;2.17e-08;6!UBERON:0002358;2.17e-08;6!UBERON:0003684;2.17e-08;6!UBERON:0001178;2.17e-08;6!UBERON:0001013;1.04e-07;14!UBERON:0005933;8.52e-07;2!UBERON:0005942;8.52e-07;2!UBERON:0005932;8.52e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002190;7.25e-16;3!UBERON:0007195;2.46e-12;1!UBERON:0002072;6.80e-10;5!UBERON:0003688;2.17e-08;6!UBERON:0002358;2.17e-08;6!UBERON:0003684;2.17e-08;6!UBERON:0001178;2.17e-08;6!UBERON:0001013;1.04e-07;14!UBERON:0005933;8.52e-07;2!UBERON:0005942;8.52e-07;2!UBERON:0005932;8.52e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,6.26e-16,3;UBERON:0007195,4.31e-12,1;UBERON:0002072,6.22e-10,5;UBERON:0003688,1.87e-08,6;UBERON:0002358,1.87e-08,6;UBERON:0003684,1.87e-08,6;UBERON:0001178,1.87e-08,6;UBERON:0001013,1.06e-07,14;UBERON:0005933,6.07e-07,2;UBERON:0005942,6.07e-07,2;UBERON:0005932,6.07e-07,2 | |||
|phase1_expression=0.363356758541113,3.21150785836475,1.83240725324762,2.00146596706261,0.446961094427288,0,2.53299878168311,0,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,1.14494394852423,1.36874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,1.79616152611729,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.137836572484531,1.6113036730241,0.580066775656914,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,1.63205341010842,1.5041393641362,2.14441903734423,4.91808946064707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0.909243296012797,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0.363356758541113,3.21150785836475,1.83240725324762,2.00146596706261,0.446961094427288,0,2.53299878168311,0,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,1.14494394852423,1.36874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,1.79616152611729,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.137836572484531,1.6113036730241,0.580066775656914,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,1.63205341010842,1.5041393641362,2.14441903734423,4.91808946064707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0.909243296012797,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p22@DIXDC1 | |short_description=p22@DIXDC1 | ||
}} | }} |
Latest revision as of 04:37, 25 September 2015
Short description: | p22@DIXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_DIXDC1_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | -241bp_to_ENST00000526418_5end |
EntrezGene: | DIXDC1 |
HGNC: | 23695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.65e-59 | 15 |
adipocyte of omentum tissue | 5.38e-16 | 3 |
subcutaneous fat cell | 6.26e-16 | 3 |
astrocyte of the cerebral cortex | 1.91e-15 | 3 |
oligodendrocyte | 3.91e-07 | 7 |
macroglial cell | 3.91e-07 | 7 |
astrocyte | 3.91e-07 | 7 |
oligodendrocyte precursor cell | 3.91e-07 | 7 |
adipocyte of breast | 4.83e-07 | 2 |
outer root sheath cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 6.26e-16 | 3 |
stroma of bone marrow | 4.31e-12 | 1 |
hypodermis | 6.22e-10 | 5 |
omentum | 1.87e-08 | 6 |
peritoneum | 1.87e-08 | 6 |
abdominal cavity | 1.87e-08 | 6 |
visceral peritoneum | 1.87e-08 | 6 |
adipose tissue | 1.06e-07 | 14 |
hair root sheath | 6.07e-07 | 2 |
hair outer root sheath | 6.07e-07 | 2 |
bulb of hair follicle | 6.07e-07 | 2 |