FFCP PHASE1:Hg19::chr1:218519582..218519594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt=P61812 | |UniProt=P61812 | ||
|association_with_transcript=5bp_to_ENST00000366929,ENST00000366930_5end | |association_with_transcript=5bp_to_ENST00000366929,ENST00000366930_5end | ||
|cluster_id=chr1:218519582..218519594,+ | |||
|coexpression_cluster_id=C927 | |coexpression_cluster_id=C927 | ||
|description=CAGE_peak_8_at_TGFB2_5end | |description=CAGE_peak_8_at_TGFB2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;6.30e-08;3!CL:0000067;6.30e-08;3!CL:0005012;6.30e-08;3!CL:0002304;6.30e-08;3!CL:0002590;1.74e-07;3!CL:0000708;7.09e-07;3 | |ontology_enrichment_celltype_v019=CL:0000064;6.30e-08;3!CL:0000067;6.30e-08;3!CL:0005012;6.30e-08;3!CL:0002304;6.30e-08;3!CL:0002590;1.74e-07;3!CL:0000708;7.09e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.46e-08,3;CL:0000067,5.46e-08,3;CL:0005012,5.46e-08,3;CL:0002304,5.46e-08,3;CL:0002590,1.42e-07,3;CL:0000708,6.27e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.16e-18!347;UBERON:0000477!2.21e-17!286;UBERON:0000119!5.23e-15!312;UBERON:0000483!7.65e-14!309;UBERON:0004111!2.89e-12!241;UBERON:0000475!3.31e-12!365;UBERON:0000033!5.21e-11!123;UBERON:0000025!6.21e-11!194;UBERON:0000153!8.06e-10!129;UBERON:0007811!8.06e-10!129;UBERON:0005743!6.42e-09!86;UBERON:0002200!7.36e-09!11;UBERON:0006876!7.36e-09!11;UBERON:0003075!1.38e-08!86;UBERON:0007284!1.38e-08!86;UBERON:0004121!1.39e-08!169;UBERON:0000073!2.25e-08!94;UBERON:0001016!2.25e-08!94;UBERON:0001017!3.70e-08!82;UBERON:0000924!7.85e-08!173;UBERON:0006601!7.85e-08!173;UBERON:0002346!1.68e-07!90;UBERON:0000468!2.14e-07!659;UBERON:0002050!4.43e-07!605;UBERON:0005423!4.43e-07!605;UBERON:0000922!4.79e-07!612;UBERON:0000955!5.65e-07!69;UBERON:0006238!5.65e-07!69;UBERON:0003104!5.90e-07!238;UBERON:0009142!5.90e-07!238;UBERON:0005256!7.68e-07!143;UBERON:0000923!8.13e-07!604;UBERON:0005291!8.13e-07!604;UBERON:0006598!8.13e-07!604;UBERON:0002532!8.13e-07!604 | |ontology_enrichment_uberon=UBERON:0000481!3.16e-18!347;UBERON:0000477!2.21e-17!286;UBERON:0000119!5.23e-15!312;UBERON:0000483!7.65e-14!309;UBERON:0004111!2.89e-12!241;UBERON:0000475!3.31e-12!365;UBERON:0000033!5.21e-11!123;UBERON:0000025!6.21e-11!194;UBERON:0000153!8.06e-10!129;UBERON:0007811!8.06e-10!129;UBERON:0005743!6.42e-09!86;UBERON:0002200!7.36e-09!11;UBERON:0006876!7.36e-09!11;UBERON:0003075!1.38e-08!86;UBERON:0007284!1.38e-08!86;UBERON:0004121!1.39e-08!169;UBERON:0000073!2.25e-08!94;UBERON:0001016!2.25e-08!94;UBERON:0001017!3.70e-08!82;UBERON:0000924!7.85e-08!173;UBERON:0006601!7.85e-08!173;UBERON:0002346!1.68e-07!90;UBERON:0000468!2.14e-07!659;UBERON:0002050!4.43e-07!605;UBERON:0005423!4.43e-07!605;UBERON:0000922!4.79e-07!612;UBERON:0000955!5.65e-07!69;UBERON:0006238!5.65e-07!69;UBERON:0003104!5.90e-07!238;UBERON:0009142!5.90e-07!238;UBERON:0005256!7.68e-07!143;UBERON:0000923!8.13e-07!604;UBERON:0005291!8.13e-07!604;UBERON:0006598!8.13e-07!604;UBERON:0002532!8.13e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.42e-15;11!UBERON:0007625;9.77e-12;11!UBERON:0005284;2.36e-11;5!UBERON:0000488;7.36e-10;4!UBERON:0001778;6.30e-08;3!UBERON:0001775;6.30e-08;3!UBERON:0003210;7.09e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0006876;1.42e-15;11!UBERON:0007625;9.77e-12;11!UBERON:0005284;2.36e-11;5!UBERON:0000488;7.36e-10;4!UBERON:0001778;6.30e-08;3!UBERON:0001775;6.30e-08;3!UBERON:0003210;7.09e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,9.74e-16,11;UBERON:0007625,9.28e-12,11;UBERON:0005284,1.71e-11,5;UBERON:0000488,6.35e-10,4;UBERON:0001778,5.46e-08,3;UBERON:0001775,5.46e-08,3;UBERON:0003210,6.27e-07,3 | |||
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| ||
|short_description=p8@TGFB2 | |short_description=p8@TGFB2 | ||
}} | }} |
Latest revision as of 04:35, 25 September 2015
Short description: | p8@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | 5bp_to_ENST00000366929, ENST00000366930_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.46e-08 | 3 |
ciliated epithelial cell | 5.46e-08 | 3 |
multi-ciliated epithelial cell | 5.46e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.46e-08 | 3 |
smooth muscle cell of the brain vasculature | 1.42e-07 | 3 |
leptomeningeal cell | 6.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 9.74e-16 | 11 |
pigment epithelium of eye | 9.28e-12 | 11 |
brain vasculature | 1.71e-11 | 5 |
atypical epithelium | 6.35e-10 | 4 |
ciliary epithelium | 5.46e-08 | 3 |
ciliary body | 5.46e-08 | 3 |
blood-cerebrospinal fluid barrier | 6.27e-07 | 3 |