FFCP PHASE1:Hg19::chr5:92922801..92922812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7025 | |EntrezGene=7025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7975 | |HGNC=7975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000512697_5end | |association_with_transcript=0bp_to_ENST00000512697_5end | ||
|cluster_id=chr5:92922801..92922812,+ | |||
|description=CAGE_peak_20_at_NR2F1_5end | |description=CAGE_peak_20_at_NR2F1_5end | ||
|id=chr5:92922801..92922812,+ | |id=chr5:92922801..92922812,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000487;8.78e-18;2!CL:0000064;6.58e-12;3!CL:0000067;6.58e-12;3!CL:0005012;6.58e-12;3!CL:0002304;6.58e-12;3!CL:0002581;1.48e-09;1!CL:0002599;1.48e-09;1 | |ontology_enrichment_celltype_v019=CL:1000487;8.78e-18;2!CL:0000064;6.58e-12;3!CL:0000067;6.58e-12;3!CL:0005012;6.58e-12;3!CL:0002304;6.58e-12;3!CL:0002581;1.48e-09;1!CL:0002599;1.48e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:1000487,1.34e-17,2;CL:0000064,9.18e-12,3;CL:0000067,9.18e-12,3;CL:0005012,9.18e-12,3;CL:0002304,9.18e-12,3;CL:0002581,1.06e-09,1;CL:0002599,1.15e-09,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001778;6.58e-12;3!UBERON:0001775;6.58e-12;3!UBERON:0000488;3.73e-09;4!UBERON:0002367;2.28e-07;11!UBERON:0007625;2.28e-07;11!UBERON:0010147;2.28e-07;11!UBERON:0003937;8.61e-07;12!UBERON:0005399;8.61e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001778;6.58e-12;3!UBERON:0001775;6.58e-12;3!UBERON:0000488;3.73e-09;4!UBERON:0002367;2.28e-07;11!UBERON:0007625;2.28e-07;11!UBERON:0010147;2.28e-07;11!UBERON:0003937;8.61e-07;12!UBERON:0005399;8.61e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,9.18e-12,3;UBERON:0001775,9.18e-12,3;UBERON:0000488,4.78e-09,4;UBERON:0007625,2.44e-07,11;UBERON:0002367,2.72e-07,11;UBERON:0010147,2.72e-07,11;UBERON:0009846,2.72e-07,11;UBERON:0003353,2.72e-07,11;UBERON:0004902,2.72e-07,11;UBERON:0003820,2.72e-07,11;UBERON:0009847,2.72e-07,11;UBERON:0003064,3.55e-07,28 | |||
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|short_description=p20@NR2F1 | |short_description=p20@NR2F1 | ||
}} | }} |
Latest revision as of 06:09, 19 September 2015
Short description: | p20@NR2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NR2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512697_5end |
EntrezGene: | NR2F1 |
HGNC: | 7975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 1.34e-17 | 2 |
ciliated cell | 9.18e-12 | 3 |
ciliated epithelial cell | 9.18e-12 | 3 |
multi-ciliated epithelial cell | 9.18e-12 | 3 |
non-pigmented ciliary epithelial cell | 9.18e-12 | 3 |
perirenal preadipocyte | 1.06e-09 | 1 |
smooth muscle cell of the esophagus | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 9.18e-12 | 3 |
ciliary body | 9.18e-12 | 3 |
atypical epithelium | 4.78e-09 | 4 |
pigment epithelium of eye | 2.44e-07 | 11 |
prostate gland | 2.72e-07 | 11 |
male accessory sex gland | 2.72e-07 | 11 |
embryonic cloacal epithelium | 2.72e-07 | 11 |
epithelium of hindgut | 2.72e-07 | 11 |
urogenital sinus epithelium | 2.72e-07 | 11 |
prostate bud | 2.72e-07 | 11 |
prostate field | 2.72e-07 | 11 |
intermediate mesoderm | 3.55e-07 | 28 |