FFCP PHASE1:Hg19::chr10:59549168..59549175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:59549168..59549175,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr10:59549168..59549175,+ | |description=CAGE_peak_at_chr10:59549168..59549175,+ | ||
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|ontology_enrichment_celltype=CL:0000764!1.22e-27!2;CL:0000765!1.22e-27!2;CL:0000050!1.22e-27!2;CL:0000038!1.22e-27!2;CL:0000558!1.22e-27!2;CL:0000547!1.22e-27!2;CL:0000549!1.22e-27!2;CL:0000550!1.22e-27!2;CL:0000552!1.22e-27!2 | |ontology_enrichment_celltype=CL:0000764!1.22e-27!2;CL:0000765!1.22e-27!2;CL:0000050!1.22e-27!2;CL:0000038!1.22e-27!2;CL:0000558!1.22e-27!2;CL:0000547!1.22e-27!2;CL:0000549!1.22e-27!2;CL:0000550!1.22e-27!2;CL:0000552!1.22e-27!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.67e-40;2!CL:0000558;3.67e-40;2 | |ontology_enrichment_celltype_v019=CL:0000764;3.67e-40;2!CL:0000558;3.67e-40;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.01e-40,2;CL:0000765,3.01e-40,2;CL:0000050,3.01e-40,2;CL:0000038,3.01e-40,2;CL:0000558,3.01e-40,2;CL:0000547,3.01e-40,2;CL:0000549,3.01e-40,2;CL:0000550,3.01e-40,2;CL:0000552,3.01e-40,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.65e-87!15;UBERON:0000179!4.65e-87!15;UBERON:0000463!4.65e-87!15;UBERON:0002390!2.33e-14!102;UBERON:0003061!2.33e-14!102;UBERON:0002193!5.62e-13!112;UBERON:0007023!8.25e-13!115;UBERON:0004535!5.40e-11!110;UBERON:0001009!1.14e-10!113;UBERON:0000341!8.60e-08!2 | |ontology_enrichment_uberon=UBERON:0000178!4.65e-87!15;UBERON:0000179!4.65e-87!15;UBERON:0000463!4.65e-87!15;UBERON:0002390!2.33e-14!102;UBERON:0003061!2.33e-14!102;UBERON:0002193!5.62e-13!112;UBERON:0007023!8.25e-13!115;UBERON:0004535!5.40e-11!110;UBERON:0001009!1.14e-10!113;UBERON:0000341!8.60e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-83;15!UBERON:0000179;1.25e-83;15!UBERON:0000463;1.25e-83;15!UBERON:0002390;3.88e-36;32!UBERON:0002193;1.32e-22;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-83;15!UBERON:0000179;1.25e-83;15!UBERON:0000463;1.25e-83;15!UBERON:0002390;3.88e-36;32!UBERON:0002193;1.32e-22;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.39e-83,15;UBERON:0000179,1.39e-83,15;UBERON:0000463,1.39e-83,15;UBERON:0007023,5.86e-17,114;UBERON:0002390,1.69e-12,98;UBERON:0003061,1.69e-12,98;UBERON:0004535,2.56e-11,109;UBERON:0002193,2.56e-11,108;UBERON:0001009,5.27e-11,112 | |||
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|short_description=p@chr10:59549168..59549175,+ | |short_description=p@chr10:59549168..59549175,+ | ||
}} | }} |
Latest revision as of 14:16, 23 July 2015
Short description: | p@chr10:59549168..59549175, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:59549168..59549175, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.01e-40 | 2 |
erythroblast | 3.01e-40 | 2 |
megakaryocyte-erythroid progenitor cell | 3.01e-40 | 2 |
erythroid progenitor cell | 3.01e-40 | 2 |
reticulocyte | 3.01e-40 | 2 |
proerythroblast | 3.01e-40 | 2 |
basophilic erythroblast | 3.01e-40 | 2 |
polychromatophilic erythroblast | 3.01e-40 | 2 |
orthochromatic erythroblast | 3.01e-40 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.39e-83 | 15 |
haemolymphatic fluid | 1.39e-83 | 15 |
organism substance | 1.39e-83 | 15 |
adult organism | 5.86e-17 | 114 |
hematopoietic system | 1.69e-12 | 98 |
blood island | 1.69e-12 | 98 |
cardiovascular system | 2.56e-11 | 109 |
hemolymphoid system | 2.56e-11 | 108 |
circulatory system | 5.27e-11 | 112 |