FFCP PHASE1:Hg19::chr10:9060826..9060835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:9060826..9060835,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr10:9060826..9060835,- | |description=CAGE_peak_at_chr10:9060826..9060835,- | ||
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|ontology_enrichment_celltype=CL:0002537!1.01e-13!5;CL:0000624!4.29e-11!6;CL:0002541!1.11e-10!3;CL:0000791!1.57e-09!18;CL:0000789!1.57e-09!18;CL:0002420!1.57e-09!18;CL:0002419!1.57e-09!18;CL:0000790!1.57e-09!18;CL:0000084!8.47e-07!25;CL:0000827!8.47e-07!25 | |ontology_enrichment_celltype=CL:0002537!1.01e-13!5;CL:0000624!4.29e-11!6;CL:0002541!1.11e-10!3;CL:0000791!1.57e-09!18;CL:0000789!1.57e-09!18;CL:0002420!1.57e-09!18;CL:0002419!1.57e-09!18;CL:0000790!1.57e-09!18;CL:0000084!8.47e-07!25;CL:0000827!8.47e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.53e-44;3!CL:0000349;2.49e-28;19!CL:0002537;1.59e-27;5!CL:0000134;1.42e-08;55 | |ontology_enrichment_celltype_v019=CL:0002541;1.53e-44;3!CL:0000349;2.49e-28;19!CL:0002537;1.59e-27;5!CL:0000134;1.42e-08;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.53e-44,3;CL:0000349,2.49e-28,19;CL:0002537,1.59e-27,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.65e-24!14;UBERON:0000158!5.65e-24!14;UBERON:0000305!1.50e-16!7;UBERON:0004871!1.67e-14!8;UBERON:0000478!1.20e-13!24;UBERON:0000476!1.11e-10!3;UBERON:0000920!1.11e-10!3;UBERON:0003124!1.32e-09!7 | |ontology_enrichment_uberon=UBERON:0005631!5.65e-24!14;UBERON:0000158!5.65e-24!14;UBERON:0000305!1.50e-16!7;UBERON:0004871!1.67e-14!8;UBERON:0000478!1.20e-13!24;UBERON:0000476!1.11e-10!3;UBERON:0000920!1.11e-10!3;UBERON:0003124!1.32e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.61e-53;10!UBERON:0000158;4.61e-53;10!UBERON:0003124;1.53e-44;3!UBERON:0000920;1.53e-44;3!UBERON:0000478;1.38e-22;24!UBERON:0000305;5.35e-20;7!UBERON:0004923;2.89e-07;55 | |ontology_enrichment_uberon_v019=UBERON:0005631;4.61e-53;10!UBERON:0000158;4.61e-53;10!UBERON:0003124;1.53e-44;3!UBERON:0000920;1.53e-44;3!UBERON:0000478;1.38e-22;24!UBERON:0000305;5.35e-20;7!UBERON:0004923;2.89e-07;55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.53e-44,3;UBERON:0005631,3.72e-38,14;UBERON:0000158,3.72e-38,14;UBERON:0000478,1.38e-22,24;UBERON:0000305,5.35e-20,7;UBERON:0003124,8.62e-20,7;UBERON:0004871,1.22e-17,8;UBERON:0004923,1.35e-08,66 | |||
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|short_description=p@chr10:9060826..9060835,- | |short_description=p@chr10:9060826..9060835,- | ||
}} | }} |
Latest revision as of 16:28, 23 July 2015
Short description: | p@chr10:9060826..9060835, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:9060826..9060835, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.53e-44 | 3 |
extraembryonic cell | 2.49e-28 | 19 |
amnion mesenchymal stem cell | 1.59e-27 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.53e-44 | 3 |
extraembryonic membrane | 3.72e-38 | 14 |
membranous layer | 3.72e-38 | 14 |
extraembryonic structure | 1.38e-22 | 24 |
amnion | 5.35e-20 | 7 |
chorion | 8.62e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.22e-17 | 8 |
organ component layer | 1.35e-08 | 66 |