FFCP PHASE1:Hg19::chr10:15001329..15001344,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644890 | |EntrezGene=644890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23429 | |HGNC=23429 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSS6 | |UniProt=Q5JSS6 | ||
|association_with_transcript=-93bp_to_ENST00000407572,ENST00000477770,NM_001080836,uc009xjk.1_5end | |association_with_transcript=-93bp_to_ENST00000407572,ENST00000477770,NM_001080836,uc009xjk.1_5end | ||
|cluster_id=chr10:15001329..15001344,+ | |||
|description=CAGE_peak_3_at_MEIG1_5end | |description=CAGE_peak_3_at_MEIG1_5end | ||
|id=chr10:15001329..15001344,+ | |id=chr10:15001329..15001344,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.71e-21;1!CL:0002615;7.02e-08;3 | |ontology_enrichment_celltype_v019=CL:0002591;5.71e-21;1!CL:0002615;7.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.31e-21,1;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.94e-09;10!UBERON:0005564;4.94e-09;10 | |ontology_enrichment_development_v019=UBERON:0009117;4.94e-09;10!UBERON:0005564;4.94e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-28!57;UBERON:0005068!1.22e-28!57;UBERON:0006241!1.22e-28!57;UBERON:0007135!1.22e-28!57;UBERON:0000955!3.96e-26!69;UBERON:0006238!3.96e-26!69;UBERON:0002616!3.73e-25!59;UBERON:0002346!3.47e-24!90;UBERON:0003075!1.94e-23!86;UBERON:0007284!1.94e-23!86;UBERON:0002780!3.02e-23!41;UBERON:0001890!3.02e-23!41;UBERON:0006240!3.02e-23!41;UBERON:0005743!5.72e-23!86;UBERON:0003080!1.86e-22!42;UBERON:0001017!1.91e-22!82;UBERON:0002020!2.51e-22!34;UBERON:0003528!2.51e-22!34;UBERON:0001893!1.21e-21!34;UBERON:0002791!6.69e-21!33;UBERON:0000073!2.55e-20!94;UBERON:0001016!2.55e-20!94;UBERON:0001869!2.84e-20!32;UBERON:0000153!9.84e-20!129;UBERON:0007811!9.84e-20!129;UBERON:0000033!5.67e-18!123;UBERON:0003056!9.17e-17!61;UBERON:0002619!4.37e-16!22;UBERON:0001950!6.48e-16!20;UBERON:0000956!4.69e-15!25;UBERON:0000203!4.69e-15!25;UBERON:0007023!2.64e-14!115;UBERON:0000924!5.89e-13!173;UBERON:0006601!5.89e-13!173;UBERON:0004121!2.81e-12!169;UBERON:0000475!2.76e-11!365;UBERON:0002420!1.72e-09!9;UBERON:0007245!1.72e-09!9;UBERON:0010009!1.72e-09!9;UBERON:0010011!1.72e-09!9;UBERON:0000454!1.72e-09!9;UBERON:0000064!5.01e-09!219;UBERON:0002308!5.95e-09!9;UBERON:0000125!5.95e-09!9;UBERON:0001871!2.49e-08!7;UBERON:0000062!1.09e-07!511;UBERON:0003076!2.26e-07!15;UBERON:0003057!2.26e-07!15;UBERON:0000025!3.61e-07!194;UBERON:0000477!3.91e-07!286;UBERON:0000481!4.71e-07!347;UBERON:0000483!5.10e-07!309;UBERON:0009663!7.28e-07!7;UBERON:0000119!8.95e-07!312 | |ontology_enrichment_uberon=UBERON:0001049!1.22e-28!57;UBERON:0005068!1.22e-28!57;UBERON:0006241!1.22e-28!57;UBERON:0007135!1.22e-28!57;UBERON:0000955!3.96e-26!69;UBERON:0006238!3.96e-26!69;UBERON:0002616!3.73e-25!59;UBERON:0002346!3.47e-24!90;UBERON:0003075!1.94e-23!86;UBERON:0007284!1.94e-23!86;UBERON:0002780!3.02e-23!41;UBERON:0001890!3.02e-23!41;UBERON:0006240!3.02e-23!41;UBERON:0005743!5.72e-23!86;UBERON:0003080!1.86e-22!42;UBERON:0001017!1.91e-22!82;UBERON:0002020!2.51e-22!34;UBERON:0003528!2.51e-22!34;UBERON:0001893!1.21e-21!34;UBERON:0002791!6.69e-21!33;UBERON:0000073!2.55e-20!94;UBERON:0001016!2.55e-20!94;UBERON:0001869!2.84e-20!32;UBERON:0000153!9.84e-20!129;UBERON:0007811!9.84e-20!129;UBERON:0000033!5.67e-18!123;UBERON:0003056!9.17e-17!61;UBERON:0002619!4.37e-16!22;UBERON:0001950!6.48e-16!20;UBERON:0000956!4.69e-15!25;UBERON:0000203!4.69e-15!25;UBERON:0007023!2.64e-14!115;UBERON:0000924!5.89e-13!173;UBERON:0006601!5.89e-13!173;UBERON:0004121!2.81e-12!169;UBERON:0000475!2.76e-11!365;UBERON:0002420!1.72e-09!9;UBERON:0007245!1.72e-09!9;UBERON:0010009!1.72e-09!9;UBERON:0010011!1.72e-09!9;UBERON:0000454!1.72e-09!9;UBERON:0000064!5.01e-09!219;UBERON:0002308!5.95e-09!9;UBERON:0000125!5.95e-09!9;UBERON:0001871!2.49e-08!7;UBERON:0000062!1.09e-07!511;UBERON:0003076!2.26e-07!15;UBERON:0003057!2.26e-07!15;UBERON:0000025!3.61e-07!194;UBERON:0000477!3.91e-07!286;UBERON:0000481!4.71e-07!347;UBERON:0000483!5.10e-07!309;UBERON:0009663!7.28e-07!7;UBERON:0000119!8.95e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;3.52e-11;2!UBERON:0002012;3.52e-11;2!UBERON:0008886;3.52e-11;2!UBERON:0000473;4.66e-11;8!UBERON:0003135;2.72e-08;11!UBERON:0002114;5.18e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000078;3.52e-11;2!UBERON:0002012;3.52e-11;2!UBERON:0008886;3.52e-11;2!UBERON:0000473;4.66e-11;8!UBERON:0003135;2.72e-08;11!UBERON:0002114;5.18e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,3.70e-11,2;UBERON:0007497,3.70e-11,2;UBERON:0003643,3.70e-11,2;UBERON:0003504,3.70e-11,2;UBERON:0003469,3.70e-11,2;UBERON:0003496,3.70e-11,2;UBERON:0002012,3.70e-11,2;UBERON:0008886,3.70e-11,2;UBERON:0007303,3.70e-11,2;UBERON:0002061,3.70e-11,2;UBERON:0005432,3.70e-11,2;UBERON:0004363,3.70e-11,2;UBERON:0000473,4.90e-11,8;UBERON:0003135,2.82e-08,11;UBERON:0002114,5.18e-08,2;UBERON:0004145,7.26e-08,3 | |||
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| ||
|short_description=p3@MEIG1 | |short_description=p3@MEIG1 | ||
}} | }} |
Latest revision as of 08:11, 17 September 2015
Short description: | p3@MEIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MEIG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -93bp_to_ENST00000407572, ENST00000477770, NM_001080836, uc009xjk.1_5end |
EntrezGene: | MEIG1 |
HGNC: | 23429 |
UniProt: | Q5JSS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.31e-21 | 1 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 3.70e-11 | 2 |
developing epithelial placode | 3.70e-11 | 2 |
respiratory system arterial blood vessel | 3.70e-11 | 2 |
respiratory system blood vessel | 3.70e-11 | 2 |
respiratory system artery | 3.70e-11 | 2 |
head blood vessel | 3.70e-11 | 2 |
pulmonary artery | 3.70e-11 | 2 |
pulmonary vascular system | 3.70e-11 | 2 |
pharyngeal vasculature | 3.70e-11 | 2 |
truncus arteriosus | 3.70e-11 | 2 |
aortic sac | 3.70e-11 | 2 |
pharyngeal arch artery | 3.70e-11 | 2 |
testis | 4.90e-11 | 8 |
male reproductive organ | 2.82e-08 | 11 |
duodenum | 5.18e-08 | 2 |
outflow tract | 7.26e-08 | 3 |