FFCP PHASE1:Hg19::chr11:62009653..62009664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10647 | |EntrezGene=10647 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18396 | |HGNC=18396 | ||
|TSSclassifier=strong | |||
|UniProt=O95969 | |UniProt=O95969 | ||
|association_with_transcript=-17bp_to_ENST00000244926_5end | |association_with_transcript=-17bp_to_ENST00000244926_5end | ||
|cluster_id=chr11:62009653..62009664,+ | |||
|coexpression_cluster_id=C101 | |coexpression_cluster_id=C101 | ||
|description=CAGE_peak_4_at_SCGB1D2_5end | |description=CAGE_peak_4_at_SCGB1D2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1001319!8.67e-07!1;CL:1000600!8.67e-07!1 | |ontology_enrichment_celltype=CL:1001319!8.67e-07!1;CL:1000600!8.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.48e-18;2!CL:0000242;6.48e-18;2!CL:0000312;5.73e-08;5!CL:0000240;7.58e-07;6!CL:0000311;7.58e-07;6!CL:0000079;7.58e-07;6!CL:0000237;7.58e-07;6 | |ontology_enrichment_celltype_v019=CL:0000123;6.48e-18;2!CL:0000242;6.48e-18;2!CL:0000312;5.73e-08;5!CL:0000240;7.58e-07;6!CL:0000311;7.58e-07;6!CL:0000079;7.58e-07;6!CL:0000237;7.58e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.48e-18,2;CL:0000312,5.73e-08,5;CL:0000240,7.58e-07,6;CL:0000311,7.58e-07,6;CL:0000079,7.58e-07,6;CL:0000237,7.58e-07,6;CL:0000036,7.58e-07,6;CL:0000357,7.58e-07,6;CL:0000114,7.58e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000357;7.58e-07;6!CL:0000114;7.58e-07;6 | |ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000357;7.58e-07;6!CL:0000114;7.58e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.77e-10;14 | |ontology_enrichment_disease_v019=DOID:3119;1.77e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.90e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.74e-25!8;UBERON:0001896!4.23e-18!3;UBERON:0005290!4.23e-18!3;UBERON:0010096!4.23e-18!3;UBERON:0007023!1.03e-15!115;UBERON:0004733!9.81e-12!12;UBERON:0002028!9.81e-12!12;UBERON:0007277!9.81e-12!12;UBERON:0004732!8.15e-11!13;UBERON:0003076!2.42e-09!15;UBERON:0003057!2.42e-09!15;UBERON:0000988!2.45e-08!3;UBERON:0001049!4.23e-08!57;UBERON:0005068!4.23e-08!57;UBERON:0006241!4.23e-08!57;UBERON:0007135!4.23e-08!57;UBERON:0002616!8.99e-08!59;UBERON:0001301!1.65e-07!1;UBERON:0006122!1.75e-07!1;UBERON:0006834!3.01e-07!1;UBERON:0000033!3.25e-07!123;UBERON:0003112!4.57e-07!1;UBERON:0000032!4.57e-07!1;UBERON:0005253!4.57e-07!1;UBERON:0003128!4.57e-07!1;UBERON:0002241!4.57e-07!1;UBERON:0001703!4.57e-07!1;UBERON:0004761!4.57e-07!1;UBERON:0009617!4.57e-07!1;UBERON:0002372!5.14e-07!1;UBERON:0001961!5.14e-07!1;UBERON:0001744!5.14e-07!1;UBERON:0001735!5.14e-07!1;UBERON:0004645!8.67e-07!1;UBERON:0001256!8.67e-07!1;UBERON:0001259!8.67e-07!1;UBERON:0002902!9.18e-07!1;UBERON:0009899!9.18e-07!1;UBERON:0000153!9.46e-07!129;UBERON:0007811!9.46e-07!129 | |ontology_enrichment_uberon=UBERON:0002298!1.74e-25!8;UBERON:0001896!4.23e-18!3;UBERON:0005290!4.23e-18!3;UBERON:0010096!4.23e-18!3;UBERON:0007023!1.03e-15!115;UBERON:0004733!9.81e-12!12;UBERON:0002028!9.81e-12!12;UBERON:0007277!9.81e-12!12;UBERON:0004732!8.15e-11!13;UBERON:0003076!2.42e-09!15;UBERON:0003057!2.42e-09!15;UBERON:0000988!2.45e-08!3;UBERON:0001049!4.23e-08!57;UBERON:0005068!4.23e-08!57;UBERON:0006241!4.23e-08!57;UBERON:0007135!4.23e-08!57;UBERON:0002616!8.99e-08!59;UBERON:0001301!1.65e-07!1;UBERON:0006122!1.75e-07!1;UBERON:0006834!3.01e-07!1;UBERON:0000033!3.25e-07!123;UBERON:0003112!4.57e-07!1;UBERON:0000032!4.57e-07!1;UBERON:0005253!4.57e-07!1;UBERON:0003128!4.57e-07!1;UBERON:0002241!4.57e-07!1;UBERON:0001703!4.57e-07!1;UBERON:0004761!4.57e-07!1;UBERON:0009617!4.57e-07!1;UBERON:0002372!5.14e-07!1;UBERON:0001961!5.14e-07!1;UBERON:0001744!5.14e-07!1;UBERON:0001735!5.14e-07!1;UBERON:0004645!8.67e-07!1;UBERON:0001256!8.67e-07!1;UBERON:0001259!8.67e-07!1;UBERON:0002902!9.18e-07!1;UBERON:0009899!9.18e-07!1;UBERON:0000153!9.46e-07!129;UBERON:0007811!9.46e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4!UBERON:0002021;6.78e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4!UBERON:0002021;6.78e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.61e-34,1;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0005904,1.32e-09,4;UBERON:0002021,7.01e-08,5 | |||
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|short_description=p4@SCGB1D2 | |short_description=p4@SCGB1D2 | ||
}} | }} |
Latest revision as of 18:40, 18 September 2015
Short description: | p4@SCGB1D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCGB1D2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | -17bp_to_ENST00000244926_5end |
EntrezGene: | SCGB1D2 |
HGNC: | 18396 |
UniProt: | O95969 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.48e-18 | 2 |
keratinocyte | 5.73e-08 | 5 |
stratified squamous epithelial cell | 7.58e-07 | 6 |
keratin accumulating cell | 7.58e-07 | 6 |
stratified epithelial cell | 7.58e-07 | 6 |
keratinizing barrier epithelial cell | 7.58e-07 | 6 |
epithelial fate stem cell | 7.58e-07 | 6 |
stratified epithelial stem cell | 7.58e-07 | 6 |
surface ectodermal cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.61e-34 | 1 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
duct of male reproductive system | 1.32e-09 | 4 |
occipital lobe | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.90e-10 | 14 |