FFCP PHASE1:Hg19::chr9:6605367..6605408,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2731 | |EntrezGene=2731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4313 | |HGNC=4313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_ENST00000463305_5end | |association_with_transcript=-95bp_to_ENST00000463305_5end | ||
|cluster_id=chr9:6605367..6605408,- | |||
|coexpression_cluster_id=C69 | |coexpression_cluster_id=C69 | ||
|description=CAGE_peak_8_at_GLDC_5end | |description=CAGE_peak_8_at_GLDC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!4.11e-27!24;CL:0000826!4.11e-27!24;CL:0000817!8.78e-26!3;CL:0000838!3.18e-25!52;CL:0000542!1.05e-24!53;CL:0000051!1.05e-24!53;CL:0000785!1.73e-17!2;CL:0000955!1.73e-17!2;CL:0000818!1.73e-17!2;CL:0000954!1.73e-17!2;CL:0000816!1.73e-17!2;CL:0002087!1.19e-09!119;CL:0000946!1.25e-09!1;CL:0000786!1.25e-09!1;CL:0000980!1.25e-09!1;CL:0000819!1.36e-09!1;CL:0000738!2.69e-09!140;CL:0002031!3.57e-09!124;CL:0000037!2.52e-08!172;CL:0000566!2.52e-08!172;CL:0000988!1.01e-07!182;CL:0002032!1.69e-07!165;CL:0000837!1.69e-07!165 | |ontology_enrichment_celltype=CL:0000945!4.11e-27!24;CL:0000826!4.11e-27!24;CL:0000817!8.78e-26!3;CL:0000838!3.18e-25!52;CL:0000542!1.05e-24!53;CL:0000051!1.05e-24!53;CL:0000785!1.73e-17!2;CL:0000955!1.73e-17!2;CL:0000818!1.73e-17!2;CL:0000954!1.73e-17!2;CL:0000816!1.73e-17!2;CL:0002087!1.19e-09!119;CL:0000946!1.25e-09!1;CL:0000786!1.25e-09!1;CL:0000980!1.25e-09!1;CL:0000819!1.36e-09!1;CL:0000738!2.69e-09!140;CL:0002031!3.57e-09!124;CL:0000037!2.52e-08!172;CL:0000566!2.52e-08!172;CL:0000988!1.01e-07!182;CL:0002032!1.69e-07!165;CL:0000837!1.69e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000817;3.05e-34;1!CL:0000945;4.19e-13;24!CL:0000542;3.53e-07;53 | |ontology_enrichment_celltype_v019=CL:0000817;3.05e-34;1!CL:0000945;4.19e-13;24!CL:0000542;3.53e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.44e-16,52;CL:0000542,4.85e-16,53;CL:0000051,4.85e-16,53;CL:0000945,4.28e-13,24;CL:0000826,4.28e-13,24;CL:0000817,2.31e-12,3;CL:0002087,1.46e-07,115;CL:0002031,2.91e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-07;53 | |ontology_enrichment_development_v019=CL:0000051;3.53e-07;53 | ||
|ontology_enrichment_disease=DOID:0060058!4.57e-21!10;DOID:2531!3.88e-12!51;DOID:0060083!3.88e-12!51;DOID:630!4.87e-10!1;DOID:0050177!4.87e-10!1;DOID:0050427!4.87e-10!1;DOID:2355!8.17e-10!1;DOID:0060060!8.91e-10!1;DOID:0060061!8.91e-10!1;DOID:8691!8.91e-10!1;DOID:0060073!1.36e-09!1;DOID:8675!1.36e-09!1 | |ontology_enrichment_disease=DOID:0060058!4.57e-21!10;DOID:2531!3.88e-12!51;DOID:0060083!3.88e-12!51;DOID:630!4.87e-10!1;DOID:0050177!4.87e-10!1;DOID:0050427!4.87e-10!1;DOID:2355!8.17e-10!1;DOID:0060060!8.91e-10!1;DOID:0060061!8.91e-10!1;DOID:8691!8.91e-10!1;DOID:0060073!1.36e-09!1;DOID:8675!1.36e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:630;7.05e-34;1!DOID:0050177;7.05e-34;1!DOID:0050427;7.05e-34;1 | |ontology_enrichment_disease_v019=DOID:630;7.05e-34;1!DOID:0050177;7.05e-34;1!DOID:0050427;7.05e-34;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,5.05e-34,1;DOID:0050177,5.05e-34,1;DOID:0050427,5.05e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1 | |ontology_enrichment_uberon=UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.14940825229924,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17392268548179,0,3.50737800003409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5698014597915,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.14940825229924,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17392268548179,0,3.50737800003409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5698014597915,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | ||
|short_description=p8@GLDC | |short_description=p8@GLDC | ||
}} | }} |
Latest revision as of 14:57, 17 September 2015
Short description: | p8@GLDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GLDC_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | -95bp_to_ENST00000463305_5end |
EntrezGene: | GLDC |
HGNC: | 4313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.44e-16 | 52 |
lymphocyte | 4.85e-16 | 53 |
common lymphoid progenitor | 4.85e-16 | 53 |
lymphocyte of B lineage | 4.28e-13 | 24 |
pro-B cell | 4.28e-13 | 24 |
precursor B cell | 2.31e-12 | 3 |
nongranular leukocyte | 1.46e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.05e-34 | 1 |
monogenic disease | 5.05e-34 | 1 |
xeroderma pigmentosum | 5.05e-34 | 1 |