FFCP PHASE1:Hg19::chr2:204400368..204400388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65059 | |EntrezGene=65059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14436 | |HGNC=14436 | ||
|TSSclassifier=strong | |||
|UniProt=Q70E73 | |UniProt=Q70E73 | ||
|association_with_transcript=-235bp_to_ENST00000319170_5end | |association_with_transcript=-235bp_to_ENST00000319170_5end | ||
|cluster_id=chr2:204400368..204400388,- | |||
|description=CAGE_peak_4_at_RAPH1_5end | |description=CAGE_peak_4_at_RAPH1_5end | ||
|id=chr2:204400368..204400388,- | |id=chr2:204400368..204400388,- | ||
|ontology_enrichment_celltype=CL:0000055!2.10e-11!180;CL:0000057!3.56e-08!75 | |ontology_enrichment_celltype=CL:0000055!2.10e-11!180;CL:0000057!3.56e-08!75 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-08,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.81e-12!659;UBERON:0000477!4.53e-11!286;UBERON:0000480!6.39e-11!626;UBERON:0000467!6.73e-11!625;UBERON:0002049!1.50e-09!79;UBERON:0007798!1.50e-09!79;UBERON:0000490!1.60e-09!138;UBERON:0004872!1.65e-09!84;UBERON:0004111!4.07e-09!241;UBERON:0000481!1.06e-08!347;UBERON:0000055!1.10e-08!69;UBERON:0000119!2.18e-08!312;UBERON:0000483!2.63e-08!309;UBERON:0001981!3.04e-08!60;UBERON:0007500!3.04e-08!60;UBERON:0004537!3.04e-08!60;UBERON:0006965!3.04e-08!60;UBERON:0000025!4.11e-08!194;UBERON:0000062!9.64e-08!511;UBERON:0000475!3.45e-07!365;UBERON:0003914!3.75e-07!118;UBERON:0002050!5.39e-07!605;UBERON:0005423!5.39e-07!605;UBERON:0000923!7.13e-07!604;UBERON:0005291!7.13e-07!604;UBERON:0006598!7.13e-07!604;UBERON:0002532!7.13e-07!604 | |ontology_enrichment_uberon=UBERON:0000468!9.81e-12!659;UBERON:0000477!4.53e-11!286;UBERON:0000480!6.39e-11!626;UBERON:0000467!6.73e-11!625;UBERON:0002049!1.50e-09!79;UBERON:0007798!1.50e-09!79;UBERON:0000490!1.60e-09!138;UBERON:0004872!1.65e-09!84;UBERON:0004111!4.07e-09!241;UBERON:0000481!1.06e-08!347;UBERON:0000055!1.10e-08!69;UBERON:0000119!2.18e-08!312;UBERON:0000483!2.63e-08!309;UBERON:0001981!3.04e-08!60;UBERON:0007500!3.04e-08!60;UBERON:0004537!3.04e-08!60;UBERON:0006965!3.04e-08!60;UBERON:0000025!4.11e-08!194;UBERON:0000062!9.64e-08!511;UBERON:0000475!3.45e-07!365;UBERON:0003914!3.75e-07!118;UBERON:0002050!5.39e-07!605;UBERON:0005423!5.39e-07!605;UBERON:0000923!7.13e-07!604;UBERON:0005291!7.13e-07!604;UBERON:0006598!7.13e-07!604;UBERON:0002532!7.13e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.82e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000948;7.82e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.53e-09,83;UBERON:0002049,1.28e-08,78;UBERON:0007798,1.28e-08,78;UBERON:0004535,1.37e-07,109;UBERON:0001009,4.42e-07,112;UBERON:0000055,4.91e-07,68;UBERON:0000948,6.40e-07,24;UBERON:0005498,6.40e-07,24;UBERON:0004140,6.40e-07,24;UBERON:0009881,6.40e-07,24;UBERON:0004141,6.40e-07,24;UBERON:0003084,6.40e-07,24;UBERON:0007005,6.40e-07,24;UBERON:0004139,6.40e-07,24;UBERON:0004291,6.40e-07,24;UBERON:0007500,8.12e-07,59;UBERON:0001981,8.12e-07,59;UBERON:0004537,8.12e-07,59;UBERON:0006965,8.12e-07,59;UBERON:0001048,9.83e-07,160 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0,0,0,0,0.737201809504527,0,0.873765488520689,0,0.247532705920093,0,0,0,0,0,0.861847406537515,0.612002073732759,1.25381888591235,0.572471974262113,0.684372125364421,2.38531015230125,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.436194716338694,0.755751887377619,0,0.929716147622738,0.822335776043652,0.929119112685311,0,0.512321413058201,0.945928919554341,3.44745680736619,0.645484683583826,1.35426486594342,0.752969358170419,0,0.449446968890169,0.918251677112708,0.962787081228281,0,0.329851300186716,0.797854630486527,0,0.580418477257168,2.26954089876456,0,0.502497330513487,0.521482918420201,0.868755378820466,3.63239701580021,2.20966581592539,0.632924774881769,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0.670700859703636,1.91793842765295,0.722878304769133,1.00267582127178,1.88300474649071,2.3858578411533,7.78615792484217,2.74150969775797,1.33037638477538,1.31752178539689,0.72038491523742,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,2.26123176769604,2.93649605346934,0.275118041940067,1.04497483268405,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,2.20597848207521,0.81014194788176,0.892997282840798,1.57170560838319,1.91439516821648,0,0.949265659568129,1.09921046358244,0,0,0.872188104285069,1.98788780678127,0.25326102332916,2.78059279707759,5.16305917347865,0.709336764396714,1.12135520028461,1.06748995729705,0.74000264525148,2.8008993185979,1.75123873690594,1.30769522490767,0.605429710579726,1.15235184896,1.40592859100278,0.936480230490962,1.1409436430889,0.896692083310806,1.29177948508141,0.323745888736263,0.421352420106746,0.408308342509787,0.245668634623536,0.103325781175765,0,0.741800787835671,7.28129089550421,5.03032699271367,0,0.125118519871964,0.554128230968366,1.31693286264251,0.612975591598039,2.70428506031874,0.453728732640084,2.87023417102179,1.49490172172997,1.48352330811693,2.70081986475962,2.47326070172253,2.83404594050192,1.11670113798954,1.35021065793013,1.46155507741798,2.01947019395292,1.65689817556139,0.80823028409406,2.13005755509969,0.503760491138201,0.169560592310488,0,0.545492241181669,0,0.243947412259191,0.397589304964456,0,0.207322110030741,0,0.36497735907583,6.25798129319264,0.643240938192885,0,2.3218396401599,1.44375896333917,0.828147600278907,0.337169380156203,1.20505514941741,0.441175890929576,1.30727666455444,0,0.674156540800822,1.56977172100277,0.38474715694639,3.69077727312324,2.80483547606892,1.2347220339942,4.41026134156626,1.26755034821831,2.94848165003288,3.54473944008842,0,1.59884970106048,1.3725424823882,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0.579652024875384,1.40890433082986,0.721832238805369,0.462985512576611,1.90254152234598,0.790204397959275,0,0.738651018262192,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.806026704325635,0.581267877027924,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,1.23344192779897,0,0.80672114403045,0.646358578788889,3.57656445851882,0,0.531876233169741,1.04007436911366,1.28603687131071,0,1.0656887160644,0.57191197463259,0.542621605391443,0,0.977208552881205,0.710783897485092,0,3.31583314765545,2.61460037580088,3.39908170018994,1.2162378064119,0,0,0.718874566474748,0,4.27910715122155,2.02693829334611,3.08214483825575,2.14873155887875,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0.831883446123229,0.178428988797162,0.157702415033935,1.87426263988341,4.8151375956435,0,1.03473071292505,1.32845119707087,1.10621501125022,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,1.48864684691266,1.68808170616869,1.12264037773229,2.17836553734692,0,1.76939313257968,1.48418066444991,0.308419387605311,0.532685175939381,0.328508624055237,0,0.232420756919918,2.90062679019893,0.40101294060657,0.276242966807689,0.574072240823034,0.728364672026868,0.524497659837696,0,0.308061348417659,0,0,0.105551628892876,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,1.75169719801128,1.92295876118521,0.82509499920588,0,0,1.6068392984416,0.870036464629098,1.23238893691716,0.460511024178389,0.689182862422653,0.751941714077915,1.74020032697074,1.19317278382541,0.979352392114111,0.661139661443912,0.192190067365106,0.893288987462089,0.2023155617111,1.39453664789186,4.7221852024596,0.6970372701606,1.54016790088044,1.06461206063404,0.869932992075073,0.55597265731176,0.286249773483982,0,0.316379424718726,2.47819252100972,0,1.71175595213568,1.90921948755562,0,0.179872457583315,0.54907405947211,0.589062011728432,1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|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0,0,0,0,0.737201809504527,0,0.873765488520689,0,0.247532705920093,0,0,0,0,0,0.861847406537515,0.612002073732759,1.25381888591235,0.572471974262113,0.684372125364421,2.38531015230125,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0.436194716338694,0.755751887377619,0,0.929716147622738,0.822335776043652,0.929119112685311,0,0.512321413058201,0.945928919554341,3.44745680736619,0.645484683583826,1.35426486594342,0.752969358170419,0,0.449446968890169,0.918251677112708,0.962787081228281,0,0.329851300186716,0.797854630486527,0,0.580418477257168,2.26954089876456,0,0.502497330513487,0.521482918420201,0.868755378820466,3.63239701580021,2.20966581592539,0.632924774881769,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0.670700859703636,1.91793842765295,0.722878304769133,1.00267582127178,1.88300474649071,2.3858578411533,7.78615792484217,2.74150969775797,1.33037638477538,1.31752178539689,0.72038491523742,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,2.26123176769604,2.93649605346934,0.275118041940067,1.04497483268405,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,2.20597848207521,0.81014194788176,0.892997282840798,1.57170560838319,1.91439516821648,0,0.949265659568129,1.09921046358244,0,0,0.872188104285069,1.98788780678127,0.25326102332916,2.78059279707759,5.16305917347865,0.709336764396714,1.12135520028461,1.06748995729705,0.74000264525148,2.8008993185979,1.75123873690594,1.30769522490767,0.605429710579726,1.15235184896,1.40592859100278,0.936480230490962,1.1409436430889,0.896692083310806,1.29177948508141,0.323745888736263,0.421352420106746,0.408308342509787,0.245668634623536,0.103325781175765,0,0.741800787835671,7.28129089550421,5.03032699271367,0,0.125118519871964,0.554128230968366,1.31693286264251,0.612975591598039,2.70428506031874,0.453728732640084,2.87023417102179,1.49490172172997,1.48352330811693,2.70081986475962,2.47326070172253,2.83404594050192,1.11670113798954,1.35021065793013,1.46155507741798,2.01947019395292,1.65689817556139,0.80823028409406,2.13005755509969,0.503760491138201,0.169560592310488,0,0.545492241181669,0,0.243947412259191,0.397589304964456,0,0.207322110030741,0,0.36497735907583,6.25798129319264,0.643240938192885,0,2.3218396401599,1.44375896333917,0.828147600278907,0.337169380156203,1.20505514941741,0.441175890929576,1.30727666455444,0,0.674156540800822,1.56977172100277,0.38474715694639,3.69077727312324,2.80483547606892,1.2347220339942,4.41026134156626,1.26755034821831,2.94848165003288,3.54473944008842,0,1.59884970106048,1.3725424823882,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0.579652024875384,1.40890433082986,0.721832238805369,0.462985512576611,1.90254152234598,0.790204397959275,0,0.738651018262192,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.806026704325635,0.581267877027924,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,1.23344192779897,0,0.80672114403045,0.646358578788889,3.57656445851882,0,0.531876233169741,1.04007436911366,1.28603687131071,0,1.0656887160644,0.57191197463259,0.542621605391443,0,0.977208552881205,0.710783897485092,0,3.31583314765545,2.61460037580088,3.39908170018994,1.2162378064119,0,0,0.718874566474748,0,4.27910715122155,2.02693829334611,3.08214483825575,2.14873155887875,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0.831883446123229,0.178428988797162,0.157702415033935,1.87426263988341,4.8151375956435,0,1.03473071292505,1.32845119707087,1.10621501125022,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,1.48864684691266,1.68808170616869,1.12264037773229,2.17836553734692,0,1.76939313257968,1.48418066444991,0.308419387605311,0.532685175939381,0.328508624055237,0,0.232420756919918,2.90062679019893,0.40101294060657,0.276242966807689,0.574072240823034,0.728364672026868,0.524497659837696,0,0.308061348417659,0,0,0.105551628892876,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,1.75169719801128,1.92295876118521,0.82509499920588,0,0,1.6068392984416,0.870036464629098,1.23238893691716,0.460511024178389,0.689182862422653,0.751941714077915,1.74020032697074,1.19317278382541,0.979352392114111,0.661139661443912,0.192190067365106,0.893288987462089,0.2023155617111,1.39453664789186,4.7221852024596,0.6970372701606,1.54016790088044,1.06461206063404,0.869932992075073,0.55597265731176,0.286249773483982,0,0.316379424718726,2.47819252100972,0,1.71175595213568,1.90921948755562,0,0.179872457583315,0.54907405947211,0.589062011728432,1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| ||
|short_description=p4@RAPH1 | |short_description=p4@RAPH1 | ||
}} | }} |
Latest revision as of 15:56, 19 September 2015
Short description: | p4@RAPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -235bp_to_ENST00000319170_5end |
EntrezGene: | RAPH1 |
HGNC: | 14436 |
UniProt: | Q70E73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 3.53e-09 | 83 |
vasculature | 1.28e-08 | 78 |
vascular system | 1.28e-08 | 78 |
cardiovascular system | 1.37e-07 | 109 |
circulatory system | 4.42e-07 | 112 |
vessel | 4.91e-07 | 68 |
heart | 6.40e-07 | 24 |
primitive heart tube | 6.40e-07 | 24 |
primary heart field | 6.40e-07 | 24 |
anterior lateral plate mesoderm | 6.40e-07 | 24 |
heart tube | 6.40e-07 | 24 |
heart primordium | 6.40e-07 | 24 |
cardiac mesoderm | 6.40e-07 | 24 |
cardiogenic plate | 6.40e-07 | 24 |
heart rudiment | 6.40e-07 | 24 |
epithelial tube open at both ends | 8.12e-07 | 59 |
blood vessel | 8.12e-07 | 59 |
blood vasculature | 8.12e-07 | 59 |
vascular cord | 8.12e-07 | 59 |
primordium | 9.83e-07 | 160 |