FFCP PHASE1:Hg19::chr21:30144478..30144487,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:30144478..30144487,-
|short_description=p@chr21:30144478..30144487,-
|description=CAGE_peak_at_chr21:30144478..30144487,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:30144478..30144487,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr21:30144478..30144487,- | |||
|id=chr21:30144478..30144487,- | |||
|ontology_enrichment_celltype=CL:1000487!1.27e-13!2;CL:0002622!1.44e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.49e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.05e-34;1!UBERON:0009847;2.19e-12;3!UBERON:0003353;2.19e-12;3!UBERON:0006603;6.98e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000162!3.77e-22!14;UBERON:0001353!3.77e-22!14;UBERON:0000163!3.77e-22!14;UBERON:0006866!3.77e-22!14;UBERON:0000164!3.77e-22!14;UBERON:0000931!3.77e-22!14;UBERON:0001046!4.91e-21!19;UBERON:0004122!1.28e-20!15;UBERON:0003101!8.97e-18!22;UBERON:0000079!8.97e-18!22;UBERON:0002367!1.39e-14!11;UBERON:0010147!1.39e-14!11;UBERON:0009846!1.39e-14!11;UBERON:0003353!1.39e-14!11;UBERON:0004902!1.39e-14!11;UBERON:0003820!1.39e-14!11;UBERON:0009847!1.39e-14!11;UBERON:0003937!2.36e-13!12;UBERON:0005399!2.36e-13!12;UBERON:0003064!7.66e-13!37;UBERON:0004921!1.29e-12!129;UBERON:0004185!1.29e-12!129;UBERON:0004119!2.67e-11!169;UBERON:0000925!2.67e-11!169;UBERON:0006595!2.67e-11!169;UBERON:0001007!2.84e-11!155;UBERON:0001555!2.84e-11!155;UBERON:0007026!2.84e-11!155;UBERON:0005156!3.27e-11!59;UBERON:0000990!3.27e-11!59;UBERON:0001008!3.02e-10!45;UBERON:0007023!8.94e-10!115;UBERON:0006947!9.30e-10!3;UBERON:0004054!9.30e-10!3;UBERON:0000077!1.32e-09!130;UBERON:0000161!2.36e-08!35;UBERON:0006554!2.82e-08!44;UBERON:0001000!3.32e-08!1;UBERON:0005352!3.32e-08!1;UBERON:0000996!4.66e-08!1;UBERON:0000989!7.45e-08!1;UBERON:0008811!7.45e-08!1;UBERON:0006258!7.45e-08!1;UBERON:0005876!7.45e-08!1;UBERON:0004874!7.45e-08!1;UBERON:0005705!8.51e-08!1;UBERON:0008193!8.51e-08!1;UBERON:0002514!8.51e-08!1;UBERON:0003462!8.51e-08!1;UBERON:0008001!8.51e-08!1;UBERON:0007914!8.51e-08!1;UBERON:0003457!8.51e-08!1;UBERON:0009292!8.51e-08!1;UBERON:0007375!8.51e-08!1;UBERON:0003323!8.51e-08!1;UBERON:0002397!8.51e-08!1;UBERON:0001709!8.51e-08!1;UBERON:0004066!8.51e-08!1;UBERON:0002244!8.51e-08!1;UBERON:0005620!8.51e-08!1;UBERON:0004068!8.51e-08!1;UBERON:0004362!8.51e-08!1;UBERON:0001301!1.11e-07!1;UBERON:0005904!1.59e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;7.05e-34;1!UBERON:0005352;7.05e-34;1!UBERON:0001255;7.05e-18;2!UBERON:0001556;7.05e-18;2!UBERON:0001043;2.89e-12;3!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0005904;1.57e-09;4!UBERON:0003101;5.49e-07;22!UBERON:0000079;5.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,5.05e-34,1;UBERON:0005352,5.05e-34,1;UBERON:0001255,6.48e-18,2;UBERON:0001556,6.48e-18,2;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0001043,2.89e-12,3;UBERON:0009143,2.89e-12,3;UBERON:0000162,1.72e-10,14;UBERON:0001353,1.72e-10,14;UBERON:0000163,1.72e-10,14;UBERON:0006866,1.72e-10,14;UBERON:0000164,1.72e-10,14;UBERON:0000931,1.72e-10,14;UBERON:0004122,7.41e-10,15;UBERON:0005904,1.44e-09,4;UBERON:0001046,5.54e-08,19;UBERON:0007023,1.08e-07,114;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
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|short_description=p@chr21:30144478..30144487,- | |||
}} | }} |
Latest revision as of 17:07, 28 July 2015
Short description: | p@chr21:30144478..30144487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:30144478..30144487, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 5.05e-34 | 1 |
spermatic cord | 5.05e-34 | 1 |
urinary bladder | 6.48e-18 | 2 |
lower urinary tract | 6.48e-18 | 2 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
esophagus | 2.89e-12 | 3 |
esophageal region | 2.89e-12 | 3 |
cloaca | 1.72e-10 | 14 |
anal region | 1.72e-10 | 14 |
embryonic cloaca | 1.72e-10 | 14 |
terminal part of digestive tract | 1.72e-10 | 14 |
primitive urogenital sinus | 1.72e-10 | 14 |
proctodeum | 1.72e-10 | 14 |
genitourinary system | 7.41e-10 | 15 |
duct of male reproductive system | 1.44e-09 | 4 |
hindgut | 5.54e-08 | 19 |
adult organism | 1.08e-07 | 114 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |