FFCP PHASE1:Hg19::chr2:56570003..56570018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56570003..56570018,+ | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_at_chr2:56570003..56570018,+ | |description=CAGE_peak_at_chr2:56570003..56570018,+ | ||
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|ontology_enrichment_celltype=CL:0000945!1.38e-27!24;CL:0000826!1.38e-27!24;CL:0000236!1.12e-21!14;CL:0000838!4.99e-12!52;CL:0000542!8.92e-12!53;CL:0000051!8.92e-12!53;CL:0000946!4.46e-10!1;CL:0000786!4.46e-10!1;CL:0000980!4.46e-10!1 | |ontology_enrichment_celltype=CL:0000945!1.38e-27!24;CL:0000826!1.38e-27!24;CL:0000236!1.12e-21!14;CL:0000838!4.99e-12!52;CL:0000542!8.92e-12!53;CL:0000051!8.92e-12!53;CL:0000946!4.46e-10!1;CL:0000786!4.46e-10!1;CL:0000980!4.46e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.99e-50;1!CL:0000786;3.99e-50;1!CL:0000945;1.33e-33;24!CL:0000542;4.61e-11;53 | |ontology_enrichment_celltype_v019=CL:0000946;3.99e-50;1!CL:0000786;3.99e-50;1!CL:0000945;1.33e-33;24!CL:0000542;4.61e-11;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.99e-50,1;CL:0000786,3.99e-50,1;CL:0000980,3.99e-50,1;CL:0000945,1.33e-33,24;CL:0000826,1.33e-33,24;CL:0000785,7.14e-26,2;CL:0000955,7.14e-26,2;CL:0000818,7.14e-26,2;CL:0000954,7.14e-26,2;CL:0000816,7.14e-26,2;CL:0000817,9.46e-18,3;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000236,3.93e-15,14;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;4.61e-11;53 | |ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;4.61e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.99e-21;10 | |ontology_enrichment_disease_v019=DOID:0060058;6.99e-21;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.99e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0001871!7.15e-10!7;UBERON:0001154!8.17e-10!1;UBERON:0001153!8.17e-10!1;UBERON:0002372!8.91e-10!1;UBERON:0001961!8.91e-10!1;UBERON:0001744!8.91e-10!1;UBERON:0001735!8.91e-10!1;UBERON:0002619!7.55e-09!22;UBERON:0000956!8.31e-08!25;UBERON:0000203!8.31e-08!25;UBERON:0000349!1.77e-07!5 | |ontology_enrichment_uberon=UBERON:0001871!7.15e-10!7;UBERON:0001154!8.17e-10!1;UBERON:0001153!8.17e-10!1;UBERON:0002372!8.91e-10!1;UBERON:0001961!8.91e-10!1;UBERON:0001744!8.91e-10!1;UBERON:0001735!8.91e-10!1;UBERON:0002619!7.55e-09!22;UBERON:0000956!8.31e-08!25;UBERON:0000203!8.31e-08!25;UBERON:0000349!1.77e-07!5 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:56570003..56570018,+ | |short_description=p@chr2:56570003..56570018,+ | ||
}} | }} |
Latest revision as of 11:03, 29 July 2015
Short description: | p@chr2:56570003..56570018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56570003..56570018, + |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.99e-50 | 1 |
plasma cell | 3.99e-50 | 1 |
plasmablast | 3.99e-50 | 1 |
lymphocyte of B lineage | 1.33e-33 | 24 |
pro-B cell | 1.33e-33 | 24 |
mature B cell | 7.14e-26 | 2 |
pre-B-II cell | 7.14e-26 | 2 |
transitional stage B cell | 7.14e-26 | 2 |
small pre-B-II cell | 7.14e-26 | 2 |
immature B cell | 7.14e-26 | 2 |
precursor B cell | 9.46e-18 | 3 |
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
B cell | 3.93e-15 | 14 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.99e-21 | 10 |