FFCP PHASE1:Hg19::chr9:117880865..117880885,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3371 | |EntrezGene=3371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5318 | |HGNC=5318 | ||
|TSSclassifier=strong | |||
|UniProt=P24821,B4E1W8,Q4LE33 | |UniProt=P24821,B4E1W8,Q4LE33 | ||
|association_with_transcript=-329bp_to_ENST00000350763,NM_002160_5end | |association_with_transcript=-329bp_to_ENST00000350763,NM_002160_5end | ||
|cluster_id=chr9:117880865..117880885,- | |||
|coexpression_cluster_id=C2686 | |coexpression_cluster_id=C2686 | ||
|description=CAGE_peak_3_at_TNC_5end | |description=CAGE_peak_3_at_TNC_5end | ||
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|ontology_enrichment_celltype=CL:0002319!1.34e-10!25;CL:0000133!1.08e-08!59;CL:0000128!1.18e-08!7;CL:0000126!1.18e-08!7;CL:0000127!1.18e-08!7;CL:0002453!1.18e-08!7;CL:0000047!1.07e-07!8;CL:0000055!2.15e-07!180;CL:0000221!3.24e-07!71 | |ontology_enrichment_celltype=CL:0002319!1.34e-10!25;CL:0000133!1.08e-08!59;CL:0000128!1.18e-08!7;CL:0000126!1.18e-08!7;CL:0000127!1.18e-08!7;CL:0002453!1.18e-08!7;CL:0000047!1.07e-07!8;CL:0000055!2.15e-07!180;CL:0000221!3.24e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.06e-23;7!CL:0000126;2.06e-23;7!CL:0000127;2.06e-23;7!CL:0002319;4.81e-13;25!CL:0000064;2.31e-11;3!CL:0000067;2.31e-11;3!CL:0005012;2.31e-11;3!CL:0002304;2.31e-11;3!CL:0002603;2.31e-11;3!CL:0002605;6.36e-11;3!CL:0000243;5.90e-09;15!CL:0000125;5.90e-09;15!CL:0000047;3.56e-08;2!CL:0000095;6.81e-08;17!CL:1000415;7.29e-07;2 | |ontology_enrichment_celltype_v019=CL:0000128;2.06e-23;7!CL:0000126;2.06e-23;7!CL:0000127;2.06e-23;7!CL:0002319;4.81e-13;25!CL:0000064;2.31e-11;3!CL:0000067;2.31e-11;3!CL:0005012;2.31e-11;3!CL:0002304;2.31e-11;3!CL:0002603;2.31e-11;3!CL:0002605;6.36e-11;3!CL:0000243;5.90e-09;15!CL:0000125;5.90e-09;15!CL:0000047;3.56e-08;2!CL:0000095;6.81e-08;17!CL:1000415;7.29e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.02e-23,7;CL:0000126,2.02e-23,7;CL:0000127,2.02e-23,7;CL:0002453,2.02e-23,7;CL:0000133,3.88e-15,59;CL:0002319,4.63e-13,25;CL:0000221,1.29e-11,72;CL:0000064,2.28e-11,3;CL:0000067,2.28e-11,3;CL:0005012,2.28e-11,3;CL:0002304,2.28e-11,3;CL:0002603,2.36e-11,3;CL:0002605,6.18e-11,3;CL:0000243,5.84e-09,15;CL:0000125,5.84e-09,15;CL:0000030,5.84e-09,15;CL:0000339,5.84e-09,15;CL:0000333,1.65e-08,41;CL:0000095,6.75e-08,17;CL:0000123,6.75e-08,17;CL:0000047,4.75e-07,8;CL:1000415,5.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000339;5.90e-09;15!CL:0000133;1.81e-08;59 | |ontology_enrichment_development_v019=CL:0000339;5.90e-09;15!CL:0000133;1.81e-08;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!8.09e-07!173;UBERON:0006601!8.09e-07!173 | |ontology_enrichment_uberon=UBERON:0000924!8.09e-07!173;UBERON:0006601!8.09e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.31e-11;3!UBERON:0001775;2.31e-11;3!UBERON:0000488;1.32e-08;4!UBERON:0007625;1.06e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001778;2.31e-11;3!UBERON:0001775;2.31e-11;3!UBERON:0000488;1.32e-08;4!UBERON:0007625;1.06e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.28e-11,3;UBERON:0001775,2.28e-11,3;UBERON:0000488,1.31e-08,4;UBERON:0007625,1.04e-07,11;UBERON:0002346,9.62e-07,86 | |||
|phase1_expression=0.181678379270557,0,0,2.00146596706261,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0.331397375727916,0,0,0,0.487932798790507,59.8368342253189,12.0360407834109,45.7643893358008,4.86601178122796,7.8018422291544,3.51519390865448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,60.5022829850034,28.6030922726708,12.2090352113445,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,1.68203280042692,0,0.74000264525148,0,0,0,0.151357427644931,1.15235184896,1.40592859100278,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0.640672166455702,0.423863802319124,1.20036438433761,0.309157587715317,0.515281080091258,0,1.0126579934476,0.487185025805993,0,0.368199594569197,0,3.19508633264953,0.705264687593482,0,0,0,0,0.243947412259191,0.662648841607426,1.97529702878181,1.7622379352613,1.51392510525377,1.82488679537915,0,4.5026865673502,0,0.464367928031979,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,6.26024186865415,0.70445216541493,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.716243852959582,0,0,0,0,73.1792517760695,16.9181810014908,0.773288812777695,4.35542289869307,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0.664225598535437,1.29058417979192,0,0,0.686286847621712,0,0,0,0,0,1.20956117331872,0,0,0,0.128139149255701,1.02341449813341,0,0,0.154209693802656,0.710246901252508,0.410635780069046,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,3.93748698718877,2.80532299729999,0,0,0,2.22342652071881,0,0,0,0,0,0,4.45160178233687,0.165284915360978,0.192190067365106,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,2.44879151050393,0.824019371133798,0,0,0.276283915531148,0,2.35217969754956,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.341380344856499,1.5255219017566,0.472775363535873,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.404406797884062,0,0,0,0,0,0.394584402849391,0,1.22429104652196,2.21153028699708,0.150323419414493,1.24425829676697,1.32930774541437,1.323967823502,0.627865836814451,0,0,0.277349346026277,0.347119476670262,0.0979923974143777,1.56706571844725,0,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0.596143835108969,0.0633107959558787,1.56441106187842,1.52301758477914,0,6.19409789704604,0,0,0,0.432164393964449,0.124252535565433,0,0,0.104602846312333,0.305994652908965,0.577901179803038,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,2.57205037544031,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,3.59190574687462,0,3.74853647927928,1.01980882368113,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.999843263696853,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0.378806010550178,0,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0.181848659202559,0.537052785212442,0,1.19428766609585,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0.491545817507439,0,0,0,0,0,1.28874165176289,0,0,0.127894371303652,0.431299245586727,16.5129238948691,0.109209638192014,0.169732529954025,2.33832412111851,0,0,0.318004350653419,0,0,1.05802783107205,0,0.0642292250964595,0,0,0.205116364240755,0.756215088665154,0,0,0,0.588886311006154,0.11796972334774,0.366857197043358,0.346576998451015,0,0.690359926060101,0,0,0.40341013740704,0,0,0.655087670040387,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,1.64092442705466,0,0,1.05522746615772,0,1.60710550763486,0.336283722218824,0,0,0.0887023701626388,0.2304679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| ||
|short_description=p3@TNC | |short_description=p3@TNC | ||
}} | }} |
Latest revision as of 17:13, 24 September 2015
Short description: | p3@TNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNC_5end |
Coexpression cluster: | C2686_Neural_Ciliary_Astrocyte_neuroblastoma_Lens_teratocarcinoma_Neurons |
Association with transcript: | -329bp_to_ENST00000350763, NM_002160_5end |
EntrezGene: | TNC |
HGNC: | 5318 |
UniProt: | P24821B4E1W8Q4LE33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.02e-23 | 7 |
macroglial cell | 2.02e-23 | 7 |
astrocyte | 2.02e-23 | 7 |
oligodendrocyte precursor cell | 2.02e-23 | 7 |
neurectodermal cell | 3.88e-15 | 59 |
neural cell | 4.63e-13 | 25 |
ectodermal cell | 1.29e-11 | 72 |
ciliated cell | 2.28e-11 | 3 |
ciliated epithelial cell | 2.28e-11 | 3 |
multi-ciliated epithelial cell | 2.28e-11 | 3 |
non-pigmented ciliary epithelial cell | 2.28e-11 | 3 |
astrocyte of the cerebellum | 2.36e-11 | 3 |
astrocyte of the cerebral cortex | 6.18e-11 | 3 |
glial cell (sensu Vertebrata) | 5.84e-09 | 15 |
glial cell | 5.84e-09 | 15 |
glioblast | 5.84e-09 | 15 |
glioblast (sensu Vertebrata) | 5.84e-09 | 15 |
migratory neural crest cell | 1.65e-08 | 41 |
neuron associated cell | 6.75e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.75e-08 | 17 |
neuronal stem cell | 4.75e-07 | 8 |
epithelial cell of gall bladder | 5.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.28e-11 | 3 |
ciliary body | 2.28e-11 | 3 |
atypical epithelium | 1.31e-08 | 4 |
pigment epithelium of eye | 1.04e-07 | 11 |
neurectoderm | 9.62e-07 | 86 |