FFCP PHASE1:Hg19::chr21:40720925..40720943,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:40720925..40720943,-
|short_description=p4@HMGN1
|description=CAGE_peak_4_at_HMGN1_5end
|association_with_transcript=0bp_to_ENST00000479586_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3150 | |EntrezGene=3150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4984 | |HGNC=4984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479586_5end | |||
|cluster_id=chr21:40720925..40720943,- | |||
|description=CAGE_peak_4_at_HMGN1_5end | |||
|id=chr21:40720925..40720943,- | |||
|ontology_enrichment_celltype=CL:0000548!1.95e-07!679;CL:0000004!1.95e-07!679;CL:0000255!1.95e-07!679;CL:0000012!2.55e-07!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.99e-21!235;DOID:14566!5.54e-20!239;DOID:2531!2.87e-17!51;DOID:0060083!2.87e-17!51;DOID:1240!1.63e-16!39;DOID:0050686!8.42e-15!137;DOID:8692!5.31e-14!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.46e-14;31!DOID:1240;5.75e-13;39!DOID:2531;5.10e-11;51!DOID:0060083;5.10e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.04e-20,235;DOID:14566,6.38e-20,239;DOID:2531,2.71e-17,51;DOID:0060083,2.71e-17,51;DOID:1240,1.54e-16,39;DOID:0050686,6.82e-15,137;DOID:8692,5.08e-14,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@HMGN1 | |||
}} | }} |
Latest revision as of 11:16, 18 September 2015
Short description: | p4@HMGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HMGN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479586_5end |
EntrezGene: | HMGN1 |
HGNC: | 4984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 1.04e-20 | 235 |
disease of cellular proliferation | 6.38e-20 | 239 |
hematologic cancer | 2.71e-17 | 51 |
immune system cancer | 2.71e-17 | 51 |
leukemia | 1.54e-16 | 39 |
organ system cancer | 6.82e-15 | 137 |
myeloid leukemia | 5.08e-14 | 31 |