FFCP PHASE1:Hg19::chr14:106173558..106173568,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106173558..106173568,- | |||
|coexpression_cluster_id=C1029 | |coexpression_cluster_id=C1029 | ||
|description=CAGE_peak_at_chr14:106173558..106173568,- | |description=CAGE_peak_at_chr14:106173558..106173568,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.72e-17;1!UBERON:0006298;8.85e-17;1!UBERON:0008801;1.21e-16;1!UBERON:0009143;2.25e-16;1!UBERON:0006242;2.25e-16;1!UBERON:0006595;2.21e-09;86 | |ontology_enrichment_development_v019=UBERON:0001045;4.72e-17;1!UBERON:0006298;8.85e-17;1!UBERON:0008801;1.21e-16;1!UBERON:0009143;2.25e-16;1!UBERON:0006242;2.25e-16;1!UBERON:0006595;2.21e-09;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.72e-43!115;UBERON:0001829!1.47e-11!2;UBERON:0001044!2.09e-08!6;UBERON:0003293!2.09e-08!6;UBERON:0003294!2.09e-08!6;UBERON:0010047!2.09e-08!6;UBERON:0000167!2.09e-08!6;UBERON:0004921!1.85e-07!129;UBERON:0004185!1.85e-07!129;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0004119!2.54e-07!169;UBERON:0000925!2.54e-07!169;UBERON:0006595!2.54e-07!169;UBERON:0000078!5.91e-07!18;UBERON:0001154!9.91e-07!1;UBERON:0001153!9.91e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!7.72e-43!115;UBERON:0001829!1.47e-11!2;UBERON:0001044!2.09e-08!6;UBERON:0003293!2.09e-08!6;UBERON:0003294!2.09e-08!6;UBERON:0010047!2.09e-08!6;UBERON:0000167!2.09e-08!6;UBERON:0004921!1.85e-07!129;UBERON:0004185!1.85e-07!129;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0004119!2.54e-07!169;UBERON:0000925!2.54e-07!169;UBERON:0006595!2.54e-07!169;UBERON:0000078!5.91e-07!18;UBERON:0001154!9.91e-07!1;UBERON:0001153!9.91e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.37e-31;2!UBERON:0004921;2.46e-25;33!UBERON:0001044;1.83e-23;6!UBERON:0003293;1.83e-23;6!UBERON:0003294;1.83e-23;6!UBERON:0010047;1.83e-23;6!UBERON:0003408;1.83e-23;6!UBERON:0000167;1.83e-23;6!UBERON:0001041;1.13e-17;14!UBERON:0001154;4.72e-17;1!UBERON:0001153;4.72e-17;1!UBERON:0009854;4.72e-17;1!UBERON:0001736;8.85e-17;1!UBERON:0001831;1.21e-16;1!UBERON:0001567;1.21e-16;1!UBERON:0001155;4.43e-16;9!UBERON:0000160;5.14e-14;17!UBERON:0000059;2.83e-13;11!UBERON:0001555;1.04e-12;54!UBERON:0005409;4.91e-11;22!UBERON:0003127;4.18e-09;2!UBERON:0000341;5.49e-09;2!UBERON:0004089;5.49e-09;2!UBERON:0001007;7.73e-08;81!UBERON:0000161;7.81e-08;19!UBERON:0000166;7.81e-08;19 | |ontology_enrichment_uberon_v019=UBERON:0001829;1.37e-31;2!UBERON:0004921;2.46e-25;33!UBERON:0001044;1.83e-23;6!UBERON:0003293;1.83e-23;6!UBERON:0003294;1.83e-23;6!UBERON:0010047;1.83e-23;6!UBERON:0003408;1.83e-23;6!UBERON:0000167;1.83e-23;6!UBERON:0001041;1.13e-17;14!UBERON:0001154;4.72e-17;1!UBERON:0001153;4.72e-17;1!UBERON:0009854;4.72e-17;1!UBERON:0001736;8.85e-17;1!UBERON:0001831;1.21e-16;1!UBERON:0001567;1.21e-16;1!UBERON:0001155;4.43e-16;9!UBERON:0000160;5.14e-14;17!UBERON:0000059;2.83e-13;11!UBERON:0001555;1.04e-12;54!UBERON:0005409;4.91e-11;22!UBERON:0003127;4.18e-09;2!UBERON:0000341;5.49e-09;2!UBERON:0004089;5.49e-09;2!UBERON:0001007;7.73e-08;81!UBERON:0000161;7.81e-08;19!UBERON:0000166;7.81e-08;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.60e-31,2;UBERON:0001044,1.97e-23,6;UBERON:0003293,1.97e-23,6;UBERON:0003294,1.97e-23,6;UBERON:0010047,1.97e-23,6;UBERON:0000167,1.97e-23,6;UBERON:0007023,3.31e-18,114;UBERON:0001154,4.72e-17,1;UBERON:0001153,4.72e-17,1;UBERON:0001045,4.72e-17,1;UBERON:0001736,8.86e-17,1;UBERON:0006298,8.86e-17,1;UBERON:0001831,1.41e-16,1;UBERON:0001567,1.41e-16,1;UBERON:0008801,1.41e-16,1;UBERON:0001155,4.00e-16,9;UBERON:0003408,2.44e-14,10;UBERON:0000160,4.80e-14,17;UBERON:0000059,2.60e-13,11;UBERON:0005409,8.18e-10,25;UBERON:0004921,1.23e-09,118;UBERON:0001007,1.53e-09,145;UBERON:0001555,1.53e-09,145;UBERON:0007026,1.53e-09,145;UBERON:0003127,4.34e-09,2;UBERON:0000341,5.08e-09,2;UBERON:0004089,5.94e-09,2;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0000166,7.94e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,8.56480138146558,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,6.72277490225378,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74580229679155,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31522474323834,0,0,0,0,0,0,0,0,0.469919589899268,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.77204176471275,0,0,0,0,0.190941474834495,0,0.870866991587845,0,0.80822463617505,4.37505452895326,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,8.56480138146558,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,6.72277490225378,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74580229679155,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31522474323834,0,0,0,0,0,0,0,0,0.469919589899268,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,2.77204176471275,0,0,0,0,0.190941474834495,0,0.870866991587845,0,0.80822463617505,4.37505452895326,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr14:106173558..106173568,- | |short_description=p@chr14:106173558..106173568,- | ||
}} | }} |
Latest revision as of 18:38, 24 July 2015
Short description: | p@chr14:106173558..106173568, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106173558..106173568, - |
Coexpression cluster: | C1029_appendix_colon_submaxillary_small_gall_throat_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.60e-31 | 2 |
saliva-secreting gland | 1.97e-23 | 6 |
gland of oral region | 1.97e-23 | 6 |
gland of foregut | 1.97e-23 | 6 |
oral gland | 1.97e-23 | 6 |
oral cavity | 1.97e-23 | 6 |
adult organism | 3.31e-18 | 114 |
vermiform appendix | 4.72e-17 | 1 |
caecum | 4.72e-17 | 1 |
midgut | 4.72e-17 | 1 |
submandibular gland | 8.86e-17 | 1 |
submandibular gland primordium | 8.86e-17 | 1 |
parotid gland | 1.41e-16 | 1 |
cheek | 1.41e-16 | 1 |
parotid gland primordium | 1.41e-16 | 1 |
colon | 4.00e-16 | 9 |
gland of gut | 2.44e-14 | 10 |
intestine | 4.80e-14 | 17 |
large intestine | 2.60e-13 | 11 |
gastrointestinal system | 8.18e-10 | 25 |
subdivision of digestive tract | 1.23e-09 | 118 |
digestive system | 1.53e-09 | 145 |
digestive tract | 1.53e-09 | 145 |
primitive gut | 1.53e-09 | 145 |
open tracheal system trachea | 4.34e-09 | 2 |
throat | 5.08e-09 | 2 |
midface | 5.94e-09 | 2 |
endoderm-derived structure | 1.47e-08 | 160 |
endoderm | 1.47e-08 | 160 |
presumptive endoderm | 1.47e-08 | 160 |
oral opening | 7.94e-07 | 22 |