FFCP PHASE1:Hg19::chr14:25501778..25501809,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:25501778..25501809,- | |||
|description=CAGE_peak_at_chr14:25501778..25501809,- | |description=CAGE_peak_at_chr14:25501778..25501809,- | ||
|id=chr14:25501778..25501809,- | |id=chr14:25501778..25501809,- | ||
|ontology_enrichment_celltype=CL:0000542!8.66e-10!53;CL:0000051!8.66e-10!53;CL:0000838!4.03e-09!52;CL:0000163!4.91e-09!9;CL:0000945!1.26e-08!24;CL:0000826!1.26e-08!24;CL:0002274!5.94e-08!5;CL:0000457!5.94e-08!5;CL:0002191!5.94e-08!5;CL:0000097!5.94e-08!5;CL:0000831!5.94e-08!5;CL:0002028!5.94e-08!5;CL:0000066!1.84e-07!254 | |ontology_enrichment_celltype=CL:0000542!8.66e-10!53;CL:0000051!8.66e-10!53;CL:0000838!4.03e-09!52;CL:0000163!4.91e-09!9;CL:0000945!1.26e-08!24;CL:0000826!1.26e-08!24;CL:0002274!5.94e-08!5;CL:0000457!5.94e-08!5;CL:0002191!5.94e-08!5;CL:0000097!5.94e-08!5;CL:0000831!5.94e-08!5;CL:0002028!5.94e-08!5;CL:0000066!1.84e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.22e-15;5!CL:0000945;3.64e-13;24!CL:0000163;1.20e-11;9!CL:0002563;2.13e-07;4!CL:0002253;7.46e-07;2 | |ontology_enrichment_celltype_v019=CL:0000097;2.22e-15;5!CL:0000945;3.64e-13;24!CL:0000163;1.20e-11;9!CL:0002563;2.13e-07;4!CL:0002253;7.46e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.29e-15,5;CL:0002028,2.29e-15,5;CL:0000945,3.71e-13,24;CL:0000826,3.71e-13,24;CL:0000163,1.19e-11,9;CL:0000542,5.54e-09,53;CL:0000051,5.54e-09,53;CL:0000838,5.52e-08,52;CL:0002563,2.09e-07,4;CL:0002253,7.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.16e-07;2 | |ontology_enrichment_development_v019=CL:0000954;9.16e-07;2 | ||
|ontology_enrichment_disease=DOID:162!1.79e-31!235;DOID:0050687!1.64e-30!143;DOID:14566!3.74e-30!239;DOID:305!1.07e-29!106;DOID:0050686!2.34e-12!137;DOID:299!7.13e-09!25;DOID:1324!9.37e-08!15;DOID:0050615!4.23e-07!16 | |ontology_enrichment_disease=DOID:162!1.79e-31!235;DOID:0050687!1.64e-30!143;DOID:14566!3.74e-30!239;DOID:305!1.07e-29!106;DOID:0050686!2.34e-12!137;DOID:299!7.13e-09!25;DOID:1324!9.37e-08!15;DOID:0050615!4.23e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:299;6.17e-12;25!DOID:0060058;8.47e-11;10!DOID:3493;6.44e-07;2 | |ontology_enrichment_disease_v019=DOID:299;6.17e-12;25!DOID:0060058;8.47e-11;10!DOID:3493;6.44e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:162,8.60e-21,235;DOID:14566,4.27e-20,239;DOID:0050687,9.75e-16,143;DOID:305,2.03e-15,106;DOID:299,6.86e-12,25;DOID:0050686,5.81e-11,137;DOID:0060058,7.71e-11,10;DOID:2531,7.35e-08,51;DOID:0060083,7.35e-08,51;DOID:3493,7.69e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.13e-07;4!UBERON:0001262;2.13e-07;4!UBERON:0004786;2.13e-07;4!UBERON:0004808;2.13e-07;4!UBERON:0001277;2.13e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001242;2.13e-07;4!UBERON:0001262;2.13e-07;4!UBERON:0004786;2.13e-07;4!UBERON:0004808;2.13e-07;4!UBERON:0001277;2.13e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.09e-07,4;UBERON:0001262,2.09e-07,4;UBERON:0004786,2.09e-07,4;UBERON:0004808,2.09e-07,4;UBERON:0001277,2.09e-07,4 | |||
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| ||
|short_description=p@chr14:25501778..25501809,- | |short_description=p@chr14:25501778..25501809,- | ||
}} | }} |
Latest revision as of 19:59, 24 July 2015
Short description: | p@chr14:25501778..25501809, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:25501778..25501809, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.29e-15 | 5 |
basophil mast progenitor cell | 2.29e-15 | 5 |
lymphocyte of B lineage | 3.71e-13 | 24 |
pro-B cell | 3.71e-13 | 24 |
endocrine cell | 1.19e-11 | 9 |
lymphocyte | 5.54e-09 | 53 |
common lymphoid progenitor | 5.54e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.52e-08 | 52 |
intestinal epithelial cell | 2.09e-07 | 4 |
epithelial cell of large intestine | 7.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.09e-07 | 4 |
wall of intestine | 2.09e-07 | 4 |
gastrointestinal system mucosa | 2.09e-07 | 4 |
gastrointestinal system epithelium | 2.09e-07 | 4 |
intestinal epithelium | 2.09e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.60e-21 | 235 |
disease of cellular proliferation | 4.27e-20 | 239 |
cell type cancer | 9.75e-16 | 143 |
carcinoma | 2.03e-15 | 106 |
adenocarcinoma | 6.86e-12 | 25 |
organ system cancer | 5.81e-11 | 137 |
lymphoma | 7.71e-11 | 10 |
hematologic cancer | 7.35e-08 | 51 |
immune system cancer | 7.35e-08 | 51 |
signet ring cell adenocarcinoma | 7.69e-07 | 2 |