FFCP PHASE1:Hg19::chr22:19748231..19748317,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:19748231..19748317,+
|short_description=p1@TBX1
|description=CAGE_peak_1_at_TBX1_5end
|association_with_transcript=-402bp_to_ENST00000475303_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6899 | |EntrezGene=6899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11592 | |HGNC=11592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-402bp_to_ENST00000475303_5end | |||
|cluster_id=chr22:19748231..19748317,+ | |||
|description=CAGE_peak_1_at_TBX1_5end | |||
|id=chr22:19748231..19748317,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.10e-10!24;CL:0000115!4.53e-09!35;CL:0002076!2.47e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.46e-13;24!CL:0000115;3.44e-08;36!CL:0000071;4.29e-08;18!CL:0002368;1.48e-07;13!CL:0002138;2.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.53e-13,24;CL:0000115,7.46e-10,36;CL:0002076,2.01e-08,42;CL:0000066,3.72e-08,253;CL:0000071,4.32e-08,18;CL:0002546,4.32e-08,18;CL:0002368,1.48e-07,13;CL:0005020,2.87e-07,6;CL:0002138,2.87e-07,6;CL:0005022,2.87e-07,6;CL:0002078,5.02e-07,45;CL:0002321,5.71e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;4.29e-08;18!CL:0005022;2.83e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.25e-12!659;UBERON:0000467!4.04e-09!625;UBERON:0000480!5.81e-09!626;UBERON:0001004!8.74e-09!72;UBERON:0000065!1.17e-08!53;UBERON:0008947!1.66e-07!38;UBERON:0003258!1.66e-07!38;UBERON:0000922!1.67e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.29e-08;18!UBERON:0001986;4.29e-08;18!UBERON:0004852;4.29e-08;18!UBERON:0001737;6.36e-08;9!UBERON:0001557;6.36e-08;9!UBERON:0000065;1.71e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.13e-08,54;UBERON:0001004,1.16e-08,74;UBERON:0004638,4.32e-08,18;UBERON:0001986,4.32e-08,18;UBERON:0004852,4.32e-08,18;UBERON:0001737,6.19e-08,9;UBERON:0008947,7.95e-08,38;UBERON:0003258,7.95e-08,38 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,4.42203911398782,1.82829939739887,1.47440361900905,9.07141518364156,0,0,6.06455129504228,4.97096063591874,0,0,0,0,0,0.612002073732759,0,0,0,0.251085279189606,0,0,0,0,0,0.309632246632152,23.9049518364521,39.1567694411725,19.5969625388397,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0.175669571386252,4.51877810467109,1.09288586487763,0,0,0,0,0,0,0,0.198762407366705,4.30117297553062,23.2584136077088,0,0,65.4780939817361,7.52381879532518,17.313922864345,29.1728335403102,70.9607699061101,64.0498614203544,56.2601358231699,257.485470713319,0,81.8243367360577,4.91148505562439,5.61323431565425,2.47745257063309,24.5306619945413,34.1735637444526,10.2592976601028,0,0,37.9401825364005,0,0,0.662045904066094,1.72101972449288,2.83734705758686,0.560677600142307,0,1.72667283892012,0,0,0,0,0.576175924479999,0.937285727335186,0,0.570471821544449,12.8525865274549,5.87172493218824,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,4.45080472701402,0.910161361938026,0,0,1.62654075833553,0,4.82875382968922,1.22595118319608,0.45071417671979,0.113432183160021,0.358779271377724,0.640672166455702,1.05965950579781,6.60200411385685,4.94652140344507,0,0.37223371266318,2.53164498361899,1.65642908774038,4.29137416214995,5.89119351310716,0.969876340912871,0,0,1.01736355386293,1.73934767846967,7.63689137654337,2.58124135850103,0.609868530647977,1.19276791489337,2.5562667431294,1.0366105501537,1.7662459561294,0,0,0.643240938192885,0,0,0,14.1968160047813,14.6668680367948,13.978639733242,14.007334537014,12.6370077573596,12.8126134319992,8.76403503041069,7.2601942096378,10.3881732375525,0.738155454624648,7.01208869017229,0.4115740113314,4.41026134156626,0,0,0,0,1.59884970106048,0,10.2067765430022,1.1240175325762,0.201057944823262,16.0178010124256,0.325808305310325,0,0,0,0,52.4050205372698,61.5770731726892,59.9300579538984,0,0,0,0,0,2.81201501960331,4.36753533317035,7.23052995936171,0,0,1.91691339582606,0,0,5.39053100406007,3.31475892859011,0.75745460055828,0,0,0,3.4214489204541,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0.845302752556,0,0,0,5.67396528093113,0,0,0,0,2.60588947434988,0,0,0,0,0,0,0,0,8.38686994220539,21.8237678084816,12.8373214536647,3.32997005335432,14.7942952236276,6.26713371339634,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,8.58840442033979,25.5086965740435,4.34024037919577,0,0,0,0.585707074963566,0,0,1.03473071292505,0,0.553107505625109,0.0868836144680828,0.195801157462741,14.4120238000559,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0,0,0,0,1.3878872442239,3.72879623157567,3.03870477251094,0,0.464841513839837,2.1754700926492,0,2.3941057123333,0,0,0.524497659837696,0,0,0,0,0,0,0.680374821106063,1.29549549661284,21.5918153766405,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,12.0595762979196,10.4009639365843,0,2.61010939388729,0.462145851343933,1.84204409671355,0,0,0.145016693914229,0.767039646744908,5.43095417445098,5.45440220691228,8.84074309879488,23.7359645239926,9.81230474298834,1.85938219718914,1.25924938732256,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,9.8077621662805,0,0,0,1.90921948755562,21.1936132853792,0,0,0,0,0,0,0,7.06769119930725,0,0.136499911407986,0,0,23.1573444289372,11.941901554342,7.0152141640602,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0.75894634753143,0.349934720244983,18.1859793051218,60.3272047982209,45.7342136417555,0.941438007767792,7.74909670808214,10.1082885400575,16.406915680857,8.95921260807142,0,0,0,0,0,0,0,0,24.1422400748089,11.5497582631603,12.0069705830706,0,0,0,1.59426272728822,0.199579371432817,0,0,26.6189991025135,0,1.82587743226554,0,0,0,0,0,0,0,3.07240764308458,2.90778940260141,3.67068111766199,0,0,0,0,0,0,0,3.07667176470977,7.03891026147178,0,0,2.62618933211459,0.296964680832639,0.307160702099232,1.9882952955326,0.422008249231538,0,0,78.9609026398695,5.57894367102995,0.828851746593443,0,0,0,0,0,0,3.06943422136123,1.57829449019094,0,0,0,0.556608588971108,1.99613798001194,0,0,6.52499617891314,2.84483620713749,0.508507300585533,0.472775363535873,0,0,14.9317495642631,0,0.60298219312704,0,0.995213339381022,0.591095237907095,0.219385397153973,0,18.6827817333328,2.46240827212151,0,1.84451123510448,1.70539524378567,0,3.50901275705111,0.366390373607449,12.2597998484286,0,0.627921025580099,0,15.7916962432026,14.312565005195,11.0762247404056,1.89753732724185,0,0,0,0.989471500037586,1.08194319871046,0.995261931078505,1.94606641907346,4.27721101453538,0,0,0,0.404406797884062,36.1159941284455,0,0,1.56531695145672,0,0.789168805698781,4.83962864194656,0,2.59064976476801,3.90840890477681,7.36186158920455,3.98792323624311,3.64091151463049,1.56966459203613,2.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| ||
|short_description=p1@TBX1 | |||
}} | }} |
Latest revision as of 03:36, 19 September 2015
Short description: | p1@TBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -402bp_to_ENST00000475303_5end |
EntrezGene: | TBX1 |
HGNC: | 11592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.53e-13 | 24 |
endothelial cell | 7.46e-10 | 36 |
endo-epithelial cell | 2.01e-08 | 42 |
epithelial cell | 3.72e-08 | 253 |
blood vessel endothelial cell | 4.32e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.32e-08 | 18 |
respiratory epithelial cell | 1.48e-07 | 13 |
lymphangioblast | 2.87e-07 | 6 |
endothelial cell of lymphatic vessel | 2.87e-07 | 6 |
vascular lymphangioblast | 2.87e-07 | 6 |
meso-epithelial cell | 5.02e-07 | 45 |
embryonic cell | 5.71e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.13e-08 | 54 |
respiratory system | 1.16e-08 | 74 |
blood vessel endothelium | 4.32e-08 | 18 |
endothelium | 4.32e-08 | 18 |
cardiovascular system endothelium | 4.32e-08 | 18 |
larynx | 6.19e-08 | 9 |
respiratory primordium | 7.95e-08 | 38 |
endoderm of foregut | 7.95e-08 | 38 |