FFCP PHASE1:Hg19::chr12:56881360..56881375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27165 | |EntrezGene=27165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |HGNC=29570 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000491880_5end | |association_with_transcript=7bp_to_ENST00000491880_5end | ||
|cluster_id=chr12:56881360..56881375,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_11_at_GLS2_5end | |description=CAGE_peak_11_at_GLS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000167!6.14e-11!1;CL:0000164!6.14e-11!1;CL:0000502!6.14e-11!1;CL:0000172!6.14e-11!1;CL:0000173!6.14e-11!1;CL:0002351!6.14e-11!1 | |ontology_enrichment_celltype=CL:0000167!6.14e-11!1;CL:0000164!6.14e-11!1;CL:0000502!6.14e-11!1;CL:0000172!6.14e-11!1;CL:0000173!6.14e-11!1;CL:0002351!6.14e-11!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-15;11!UBERON:0009497;3.43e-13;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.17e-15;11!UBERON:0009497;3.43e-13;13 | ||
|ontology_enrichment_disease=DOID:4430!6.14e-11!1 | |ontology_enrichment_disease=DOID:4430!6.14e-11!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001897!5.94e-20!2;UBERON:0002146!6.77e-11!1;UBERON:0005623!6.77e-11!1;UBERON:0002581!1.77e-10!1 | |ontology_enrichment_uberon=UBERON:0001897!5.94e-20!2;UBERON:0002146!6.77e-11!1;UBERON:0005623!6.77e-11!1;UBERON:0002581!1.77e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.48e-19;19!UBERON:0006925;1.48e-19;19!UBERON:0002423;4.40e-15;25!UBERON:0002365;4.52e-12;31!UBERON:0002330;4.52e-12;31!UBERON:0002368;3.74e-10;33!UBERON:0000949;1.91e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.48e-19;19!UBERON:0006925;1.48e-19;19!UBERON:0002423;4.40e-15;25!UBERON:0002365;4.52e-12;31!UBERON:0002330;4.52e-12;31!UBERON:0002368;3.74e-10;33!UBERON:0000949;1.91e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.48e-19,19;UBERON:0006925,1.48e-19,19;UBERON:0008836,1.48e-19,19;UBERON:0008835,5.13e-17,22;UBERON:0003894,5.13e-17,22;UBERON:0009854,2.57e-16,23;UBERON:0007499,4.40e-15,25;UBERON:0009497,4.40e-15,25;UBERON:0000015,4.40e-15,25;UBERON:0002423,4.40e-15,25;UBERON:0006235,4.40e-15,25;UBERON:0004161,4.40e-15,25;UBERON:0009856,1.55e-14,26;UBERON:0002365,2.48e-12,31;UBERON:0002330,2.48e-12,31;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0003929,2.08e-07,54;UBERON:0005172,2.08e-07,54;UBERON:0005173,2.08e-07,54;UBERON:0002530,7.68e-07,59;UBERON:0002417,9.72e-07,60;UBERON:0000916,9.72e-07,60 | |||
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|short_description=p11@GLS2 | |short_description=p11@GLS2 | ||
}} | }} |
Latest revision as of 11:07, 19 September 2015
Short description: | p11@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GLS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 7bp_to_ENST00000491880_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.48e-19 | 19 |
digestive gland | 1.48e-19 | 19 |
liver bud | 1.48e-19 | 19 |
hepatic diverticulum | 5.13e-17 | 22 |
liver primordium | 5.13e-17 | 22 |
digestive tract diverticulum | 2.57e-16 | 23 |
epithelial sac | 4.40e-15 | 25 |
epithelium of foregut-midgut junction | 4.40e-15 | 25 |
anatomical boundary | 4.40e-15 | 25 |
hepatobiliary system | 4.40e-15 | 25 |
foregut-midgut junction | 4.40e-15 | 25 |
septum transversum | 4.40e-15 | 25 |
sac | 1.55e-14 | 26 |
exocrine gland | 2.48e-12 | 31 |
exocrine system | 2.48e-12 | 31 |
endocrine gland | 5.12e-11 | 35 |
endocrine system | 9.62e-09 | 45 |
gut epithelium | 2.08e-07 | 54 |
abdomen element | 2.08e-07 | 54 |
abdominal segment element | 2.08e-07 | 54 |
gland | 7.68e-07 | 59 |
abdominal segment of trunk | 9.72e-07 | 60 |
abdomen | 9.72e-07 | 60 |