FFCP PHASE1:Hg19::chr4:2747958..2747963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79155 | |EntrezGene=79155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19118 | |HGNC=19118 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000505186_5end | |association_with_transcript=-73bp_to_ENST00000505186_5end | ||
|cluster_id=chr4:2747958..2747963,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_11_at_TNIP2_5end | |description=CAGE_peak_11_at_TNIP2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.72e-16!42;CL:0000860!2.62e-15!45;CL:0002194!2.17e-10!63;CL:0000576!2.17e-10!63;CL:0000040!2.17e-10!63;CL:0000559!2.17e-10!63;CL:0002009!4.91e-10!65;CL:0000839!3.07e-09!70;CL:0000557!4.30e-09!71;CL:0000766!2.03e-08!76;CL:0002087!1.75e-07!119;CL:0002031!4.09e-07!124 | |ontology_enrichment_celltype=CL:0002057!1.72e-16!42;CL:0000860!2.62e-15!45;CL:0002194!2.17e-10!63;CL:0000576!2.17e-10!63;CL:0000040!2.17e-10!63;CL:0000559!2.17e-10!63;CL:0002009!4.91e-10!65;CL:0000839!3.07e-09!70;CL:0000557!4.30e-09!71;CL:0000766!2.03e-08!76;CL:0002087!1.75e-07!119;CL:0002031!4.09e-07!124 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.81e-21;10!UBERON:0007687;3.81e-21;10!UBERON:0003104;4.53e-08;31 | |ontology_enrichment_development_v019=UBERON:0003918;3.81e-21;10!UBERON:0007687;3.81e-21;10!UBERON:0003104;4.53e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001736!1.19e-10!1;UBERON:0006298!1.19e-10!1;UBERON:0004913!3.01e-10!1;UBERON:0003703!3.01e-10!1;UBERON:0001174!3.01e-10!1;UBERON:0004914!3.01e-10!1;UBERON:0002371!8.00e-10!80;UBERON:0001474!4.84e-09!86;UBERON:0004765!1.73e-07!101;UBERON:0001434!1.73e-07!101;UBERON:0002390!2.12e-07!102;UBERON:0003061!2.12e-07!102 | |ontology_enrichment_uberon=UBERON:0001736!1.19e-10!1;UBERON:0006298!1.19e-10!1;UBERON:0004913!3.01e-10!1;UBERON:0003703!3.01e-10!1;UBERON:0001174!3.01e-10!1;UBERON:0004914!3.01e-10!1;UBERON:0002371!8.00e-10!80;UBERON:0001474!4.84e-09!86;UBERON:0004765!1.73e-07!101;UBERON:0001434!1.73e-07!101;UBERON:0002390!2.12e-07!102;UBERON:0003061!2.12e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | |ontology_enrichment_uberon_v019=UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0000489,7.41e-08,31 | |||
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|short_description=p11@TNIP2 | |short_description=p11@TNIP2 | ||
}} | }} |
Latest revision as of 12:02, 17 September 2015
Short description: | p11@TNIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TNIP2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -73bp_to_ENST00000505186_5end |
EntrezGene: | TNIP2 |
HGNC: | 19118 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 4.34e-09 | 26 |
kidney mesenchyme | 4.34e-09 | 26 |
upper urinary tract | 4.34e-09 | 26 |
kidney rudiment | 4.34e-09 | 26 |
kidney field | 4.34e-09 | 26 |
cavitated compound organ | 7.41e-08 | 31 |