FFCP PHASE1:Hg19::chr16:16138392..16138424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:16138392..16138424,+ | |||
|description=CAGE_peak_at_chr16:16138392..16138424,+ | |description=CAGE_peak_at_chr16:16138392..16138424,+ | ||
|id=chr16:16138392..16138424,+ | |id=chr16:16138392..16138424,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;9.12e-14;1!CL:0002591;9.12e-14;1!CL:0002593;9.24e-08;2!CL:0002602;1.59e-07;2 | |ontology_enrichment_celltype_v019=CL:0002581;9.12e-14;1!CL:0002591;9.12e-14;1!CL:0002593;9.24e-08;2!CL:0002602;1.59e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.85e-14,1;CL:0002591,1.25e-13,1;CL:0002593,9.25e-08,2;CL:0002602,1.36e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;9.12e-14;1!DOID:3149;9.12e-14;1!DOID:3451;1.59e-07;2!DOID:4159;1.59e-07;2!DOID:0060122;1.59e-07;2 | |ontology_enrichment_disease_v019=DOID:3151;9.12e-14;1!DOID:3149;9.12e-14;1!DOID:3451;1.59e-07;2!DOID:4159;1.59e-07;2!DOID:0060122;1.59e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.83e-13,1;DOID:3149,1.83e-13,1;DOID:3451,2.25e-07,2;DOID:4159,2.25e-07,2;DOID:0060122,2.25e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;9.24e-08;2!UBERON:0000078;1.59e-07;2!UBERON:0006444;1.59e-07;2!UBERON:0001995;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0005406;1.59e-07;2!UBERON:0004715;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0000160;8.92e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0002456;9.24e-08;2!UBERON:0000078;1.59e-07;2!UBERON:0006444;1.59e-07;2!UBERON:0001995;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0005406;1.59e-07;2!UBERON:0004715;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0000160;8.92e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,9.25e-08,2;UBERON:0005406,1.28e-07,2;UBERON:0006444,1.36e-07,2;UBERON:0001995,1.36e-07,2;UBERON:0004715,1.36e-07,2;UBERON:0000078,1.87e-07,2;UBERON:0007497,1.87e-07,2;UBERON:0003643,1.87e-07,2;UBERON:0003504,1.87e-07,2;UBERON:0003469,1.87e-07,2;UBERON:0003496,1.87e-07,2;UBERON:0002012,1.87e-07,2;UBERON:0008886,1.87e-07,2;UBERON:0007303,1.87e-07,2;UBERON:0002061,1.87e-07,2;UBERON:0005432,1.87e-07,2;UBERON:0004363,1.87e-07,2;UBERON:0000160,8.67e-07,17 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.247532705920093,1.32558950291166,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0.154934401160603,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.786021525498329,0.205601498999509,0.334372990781356,0,0.946895611469467,0,0.222820913770347,0,0.443067789167242,0.270803863765016,0,0,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,1.0843174571537,0,0.579386075843295,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.587403472388222,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.184161977871793,0.34444334449382,0.182091168006717,0.655622074797121,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.386682873168488,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0,0,0.421258456238981,0,0,3.16950440270266,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,0.709522128141196,0.633322905892992,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0.383010740264733,0.211673582723883,0,0.561594356226918,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0,0,0,0.326465616318295,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0.13480708770837,0,0,0,0,0,0.687697182986169,0.415440338029185,0,0,0,1.0063040627978,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0.246277562248017,0,0.226624183040251,0,1.32506888912221,0,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0.276697269872462,0.124980407962107,0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| ||
|short_description=p@chr16:16138392..16138424,+ | |short_description=p@chr16:16138392..16138424,+ | ||
}} | }} |
Latest revision as of 06:40, 25 July 2015
Short description: | p@chr16:16138392..16138424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:16138392..16138424, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.85e-14 | 1 |
smooth muscle cell of the pulmonary artery | 1.25e-13 | 1 |
smooth muscle cell of the internal thoracic artery | 9.25e-08 | 2 |
annulus pulposus cell | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 9.25e-08 | 2 |
perirenal fat | 1.28e-07 | 2 |
annulus fibrosus | 1.36e-07 | 2 |
fibrocartilage | 1.36e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.36e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.87e-07 | 2 |
developing epithelial placode | 1.87e-07 | 2 |
respiratory system arterial blood vessel | 1.87e-07 | 2 |
respiratory system blood vessel | 1.87e-07 | 2 |
respiratory system artery | 1.87e-07 | 2 |
head blood vessel | 1.87e-07 | 2 |
pulmonary artery | 1.87e-07 | 2 |
pulmonary vascular system | 1.87e-07 | 2 |
pharyngeal vasculature | 1.87e-07 | 2 |
truncus arteriosus | 1.87e-07 | 2 |
aortic sac | 1.87e-07 | 2 |
pharyngeal arch artery | 1.87e-07 | 2 |
intestine | 8.67e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.83e-13 | 1 |
keratoacanthoma | 1.83e-13 | 1 |
skin carcinoma | 2.25e-07 | 2 |
skin cancer | 2.25e-07 | 2 |
integumentary system cancer | 2.25e-07 | 2 |