FFCP PHASE1:Hg19::chr19:3068219..3068225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:3068219..3068225,- | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_at_chr19:3068219..3068225,- | |description=CAGE_peak_at_chr19:3068219..3068225,- | ||
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|ontology_enrichment_celltype=CL:0000167!1.03e-09!1;CL:0000164!1.03e-09!1;CL:0000502!1.03e-09!1;CL:0000172!1.03e-09!1;CL:0000173!1.03e-09!1;CL:0002351!1.03e-09!1;CL:0001024!2.55e-09!1;CL:0002566!5.28e-09!1 | |ontology_enrichment_celltype=CL:0000167!1.03e-09!1;CL:0000164!1.03e-09!1;CL:0000502!1.03e-09!1;CL:0000172!1.03e-09!1;CL:0000173!1.03e-09!1;CL:0002351!1.03e-09!1;CL:0001024!2.55e-09!1;CL:0002566!5.28e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.09e-23;1!CL:0000164;2.09e-23;1!CL:0000502;2.09e-23;1!CL:0000172;2.09e-23;1!CL:0000173;2.09e-23;1!CL:0002535;1.75e-12;2 | |ontology_enrichment_celltype_v019=CL:0000167;2.09e-23;1!CL:0000164;2.09e-23;1!CL:0000502;2.09e-23;1!CL:0000172;2.09e-23;1!CL:0000173;2.09e-23;1!CL:0002535;1.75e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.10e-23,1;CL:0000164,2.10e-23,1;CL:0000502,2.10e-23,1;CL:0000172,2.10e-23,1;CL:0000173,2.10e-23,1;CL:0002351,2.10e-23,1;CL:0002535,1.65e-12,2 | |||
|ontology_enrichment_development_v019=CL:0002351;2.09e-23;1 | |ontology_enrichment_development_v019=CL:0002351;2.09e-23;1 | ||
|ontology_enrichment_disease=DOID:169!9.92e-13!6;DOID:3119!9.50e-10!14;DOID:4430!1.03e-09!1;DOID:171!7.78e-08!10;DOID:0050687!3.10e-07!143 | |ontology_enrichment_disease=DOID:169!9.92e-13!6;DOID:3119!9.50e-10!14;DOID:4430!1.03e-09!1;DOID:171!7.78e-08!10;DOID:0050687!3.10e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.39e-25;14!DOID:4430;2.09e-23;1 | |ontology_enrichment_disease_v019=DOID:3119;1.39e-25;14!DOID:4430;2.09e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.19e-25,14;DOID:4430,2.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000341!5.97e-17!2;UBERON:0003296!4.51e-09!4;UBERON:0010133!4.51e-09!4;UBERON:0000013!2.68e-07!5;UBERON:0002410!2.68e-07!5 | |ontology_enrichment_uberon=UBERON:0000341!5.97e-17!2;UBERON:0003296!4.51e-09!4;UBERON:0010133!4.51e-09!4;UBERON:0000013!2.68e-07!5;UBERON:0002410!2.68e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.75e-12;2!UBERON:0004801;1.75e-12;2!UBERON:0002114;1.30e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0006955;1.75e-12;2!UBERON:0004801;1.75e-12;2!UBERON:0002114;1.30e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.65e-12,2;UBERON:0004801,1.65e-12,2;UBERON:0002114,1.51e-08,2 | |||
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|short_description=p@chr19:3068219..3068225,- | |short_description=p@chr19:3068219..3068225,- | ||
}} | }} |
Latest revision as of 06:08, 26 July 2015
Short description: | p@chr19:3068219..3068225, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3068219..3068225, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.10e-23 | 1 |
enteroendocrine cell | 2.10e-23 | 1 |
type D enteroendocrine cell | 2.10e-23 | 1 |
somatostatin secreting cell | 2.10e-23 | 1 |
pancreatic D cell | 2.10e-23 | 1 |
progenitor cell of endocrine pancreas | 2.10e-23 | 1 |
epithelial cell of cervix | 1.65e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.65e-12 | 2 |
cervix epithelium | 1.65e-12 | 2 |
duodenum | 1.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.19e-25 | 14 |
somatostatinoma | 2.10e-23 | 1 |